Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU350716 |
| length | 535 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G296138 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 15223646 ~ 15305400 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU350684 | lncRNA | upstream | 80579 | 15137607 ~ 15143067 (+) | False | trdn |
| TU350475 | lncRNA | upstream | 353374 | 14843050 ~ 14870272 (+) | True | G295917 |
| TU350446 | lncRNA | upstream | 447714 | 14775723 ~ 14775932 (+) | True | G295896 |
| TU350399 | lncRNA | upstream | 503678 | 14718285 ~ 14719968 (+) | True | G295852 |
| TU350359 | lncRNA | upstream | 557879 | 14665532 ~ 14665767 (+) | True | G295822 |
| TU350770 | lncRNA | downstream | 161 | 15305561 ~ 15305765 (+) | True | G296181 |
| TU350736 | lncRNA | downstream | 18449 | 15323849 ~ 15324587 (+) | True | G296151 |
| TU350837 | lncRNA | downstream | 89419 | 15394819 ~ 15395021 (+) | True | G296240 |
| TU350845 | lncRNA | downstream | 150882 | 15456282 ~ 15501827 (+) | True | G296247 |
| TU350847 | lncRNA | downstream | 169458 | 15474858 ~ 15476834 (+) | True | G296249 |
| XM_026922916.2 | mRNA | upstream | 34034 | 15123767 ~ 15189612 (+) | True | trdn |
| XM_026922763.2 | mRNA | upstream | 382345 | 14837944 ~ 14841301 (+) | True | hddc2 |
| XM_034313826.1 | mRNA | upstream | 516618 | 14697281 ~ 14707028 (+) | True | esco2 |
| XM_026922601.2 | mRNA | upstream | 563700 | 14645633 ~ 14659946 (+) | True | scara3 |
| XM_026923152.2 | mRNA | upstream | 602748 | 14597191 ~ 14620898 (+) | True | reps1 |
| XM_026923226.2 | mRNA | downstream | 9653 | 15315053 ~ 15322483 (+) | True | serinc1 |
| XM_026923493.2 | mRNA | downstream | 179691 | 15485091 ~ 15487397 (+) | True | LOC113532226 |
| XM_034313924.1 | mRNA | downstream | 179727 | 15485127 ~ 15487397 (+) | False | LOC113532226 |
| XM_034313747.1 | mRNA | downstream | 201459 | 15506859 ~ 15548151 (+) | False | tbc1d32 |
| XM_034313746.1 | mRNA | downstream | 201462 | 15506862 ~ 15557349 (+) | True | tbc1d32 |
| trnas-gcu_22 | other | upstream | 822171 | 14401394 ~ 14401475 (+) | True | trnas-gcu_22 |
| trnas-gcu_21 | other | upstream | 824267 | 14399298 ~ 14399379 (+) | True | trnas-gcu_21 |
| trnas-gcu_20 | other | upstream | 825714 | 14397851 ~ 14397932 (+) | True | trnas-gcu_20 |
| trnas-gcu_19 | other | upstream | 826420 | 14397145 ~ 14397226 (+) | True | trnas-gcu_19 |
| trnas-gcu_16 | other | upstream | 836089 | 14387476 ~ 14387557 (+) | True | trnas-gcu_16 |
| trnaa-cgc_8 | other | downstream | 30784 | 15336184 ~ 15336256 (+) | True | trnaa-cgc_8 |
| trnad-guc_27 | other | downstream | 461320 | 15766720 ~ 15766791 (+) | True | trnad-guc_27 |
| trnav-cac_15 | other | downstream | 461538 | 15766938 ~ 15767010 (+) | True | trnav-cac_15 |
| trnav-cac_18 | other | downstream | 466297 | 15771697 ~ 15771769 (+) | True | trnav-cac_18 |
| trnad-guc_30 | other | downstream | 469424 | 15774824 ~ 15774895 (+) | True | trnad-guc_30 |
