Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU353857 |
| length | 307 |
| lncRNA type | inter_gene |
| GC content | 0.29 |
| exon number | 1 |
| gene id | G298752 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 20236928 ~ 20237234 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004580091.1 | lncRNA | downstream | 46284 | 20190083 ~ 20190644 (-) | True | LOC117599709 |
| XR_004580094.1 | lncRNA | downstream | 53354 | 20183058 ~ 20183574 (-) | True | LOC117599712 |
| TU353600 | lncRNA | downstream | 282630 | 19953944 ~ 19954298 (-) | True | G298549 |
| XR_004580095.1 | lncRNA | downstream | 409004 | 19826993 ~ 19827924 (-) | True | LOC117599713 |
| TU353414 | lncRNA | downstream | 694167 | 19518847 ~ 19542761 (-) | False | G298444 |
| TU353862 | lncRNA | upstream | 6194 | 20243428 ~ 20246402 (-) | True | G298757 |
| TU353863 | lncRNA | upstream | 10001 | 20247235 ~ 20247915 (-) | True | G298758 |
| TU353886 | lncRNA | upstream | 128051 | 20365285 ~ 20365496 (-) | True | trnah-gug_23 |
| TU353904 | lncRNA | upstream | 151850 | 20389084 ~ 20389700 (-) | False | G298794 |
| TU353905 | lncRNA | upstream | 152900 | 20390134 ~ 20390717 (-) | True | G298794 |
| XM_026909974.2 | mRNA | downstream | 87455 | 20147871 ~ 20149473 (-) | True | LOC113523908 |
| XM_034313569.1 | mRNA | downstream | 129683 | 20105758 ~ 20107245 (-) | True | LOC117599697 |
| XM_034313602.1 | mRNA | downstream | 305675 | 19924626 ~ 19931253 (-) | True | LOC117599719 |
| XM_034313542.1 | mRNA | downstream | 359183 | 19876162 ~ 19877745 (-) | True | LOC117599680 |
| XM_026911127.2 | mRNA | upstream | 39733 | 20276967 ~ 20279845 (-) | True | nfkbiaa |
| XM_034313541.1 | mRNA | upstream | 56178 | 20293412 ~ 20303747 (-) | True | gtf2a1 |
| XM_026911126.2 | mRNA | upstream | 155406 | 20392640 ~ 20403559 (-) | True | LOC113524770 |
| XM_026911108.2 | mRNA | upstream | 188051 | 20425285 ~ 20437474 (-) | False | LOC113524747 |
| XM_026911106.2 | mRNA | upstream | 188051 | 20425285 ~ 20437474 (-) | False | LOC113524747 |
| TU353574 | other | downstream | 295929 | 19884160 ~ 19940999 (-) | False | G298543 |
| TU353585 | other | downstream | 351133 | 19884807 ~ 19885795 (-) | True | G298543 |
| XR_004580096.1 | other | downstream | 524877 | 19711647 ~ 19712051 (-) | True | LOC117599714 |
| TU353447 | other | downstream | 645491 | 19590959 ~ 19591437 (-) | True | G298475 |
| LOC113524722 | other | downstream | 762952 | 19472020 ~ 19473976 (-) | True | LOC113524722 |
| trnae-uuc_5 | other | upstream | 72055 | 20309289 ~ 20309360 (-) | True | trnae-uuc_5 |
| trnar-acg_12 | other | upstream | 72286 | 20309520 ~ 20309592 (-) | True | trnar-acg_12 |
| trnah-gug_15 | other | upstream | 73574 | 20310808 ~ 20310879 (-) | True | trnah-gug_15 |
| trnar-acg_15 | other | upstream | 97489 | 20334723 ~ 20334795 (-) | True | trnar-acg_15 |
| trnah-gug_19 | other | upstream | 99810 | 20337044 ~ 20337115 (-) | True | trnah-gug_19 |
