Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU353886 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | trnah-gug_23 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 20365285 ~ 20365551 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU353863 | lncRNA | downstream | 117370 | 20247235 ~ 20247915 (-) | True | G298758 |
| TU353862 | lncRNA | downstream | 118883 | 20243428 ~ 20246402 (-) | True | G298757 |
| TU353857 | lncRNA | downstream | 128051 | 20236928 ~ 20237234 (-) | True | G298752 |
| XR_004580091.1 | lncRNA | downstream | 174641 | 20190083 ~ 20190644 (-) | True | LOC117599709 |
| XR_004580094.1 | lncRNA | downstream | 181711 | 20183058 ~ 20183574 (-) | True | LOC117599712 |
| TU353904 | lncRNA | upstream | 23588 | 20389084 ~ 20389700 (-) | False | G298794 |
| TU353905 | lncRNA | upstream | 24638 | 20390134 ~ 20390717 (-) | True | G298794 |
| TU353913 | lncRNA | upstream | 64018 | 20429514 ~ 20430208 (-) | True | G298801 |
| TU353941 | lncRNA | upstream | 126513 | 20492009 ~ 20501140 (-) | True | G298823 |
| XR_004580093.1 | lncRNA | upstream | 279893 | 20645389 ~ 20646391 (-) | True | LOC117599711 |
| XM_034313541.1 | mRNA | downstream | 61538 | 20293412 ~ 20303747 (-) | True | gtf2a1 |
| XM_026911127.2 | mRNA | downstream | 85440 | 20276967 ~ 20279845 (-) | True | nfkbiaa |
| XM_026909974.2 | mRNA | downstream | 215812 | 20147871 ~ 20149473 (-) | True | LOC113523908 |
| XM_034313569.1 | mRNA | downstream | 258040 | 20105758 ~ 20107245 (-) | True | LOC117599697 |
| XM_034313602.1 | mRNA | downstream | 434032 | 19924626 ~ 19931253 (-) | True | LOC117599719 |
| XM_026911126.2 | mRNA | upstream | 27144 | 20392640 ~ 20403559 (-) | True | LOC113524770 |
| XM_026911108.2 | mRNA | upstream | 59789 | 20425285 ~ 20437474 (-) | False | LOC113524747 |
| XM_026911106.2 | mRNA | upstream | 59789 | 20425285 ~ 20437474 (-) | False | LOC113524747 |
| XM_026911107.2 | mRNA | upstream | 59789 | 20425285 ~ 20437474 (-) | True | LOC113524747 |
| XM_034313575.1 | mRNA | upstream | 74124 | 20439620 ~ 20442292 (-) | True | LOC117599698 |
| trnar-acg_18 | other | downstream | 527 | 20364686 ~ 20364758 (-) | True | trnar-acg_18 |
| trnae-uuc_12 | other | downstream | 759 | 20364455 ~ 20364526 (-) | True | trnae-uuc_12 |
| trnah-gug_22 | other | downstream | 6958 | 20358256 ~ 20358327 (-) | True | trnah-gug_22 |
| trnar-acg_17 | other | downstream | 10387 | 20354826 ~ 20354898 (-) | True | trnar-acg_17 |
| trnae-uuc_11 | other | downstream | 10617 | 20354597 ~ 20354668 (-) | True | trnae-uuc_11 |
| trnah-gug_24 | other | upstream | 4712 | 20370208 ~ 20370279 (-) | True | trnah-gug_24 |
| trnae-uuc_13 | other | upstream | 12809 | 20378305 ~ 20378376 (-) | True | trnae-uuc_13 |
| trnah-gug_25 | other | upstream | 13338 | 20378834 ~ 20378905 (-) | True | trnah-gug_25 |
| trnae-uuc_14 | other | upstream | 53794 | 20419290 ~ 20419361 (-) | True | trnae-uuc_14 |
| trnae-uuc_15 | other | upstream | 56359 | 20421855 ~ 20421926 (-) | True | trnae-uuc_15 |
