Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU354114 |
| length | 231 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G298934 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 20949842 ~ 20950072 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003402683.2 | lncRNA | downstream | 2484 | 20932603 ~ 20947358 (-) | True | LOC113525588 |
| TU354077 | lncRNA | downstream | 61190 | 20833006 ~ 20888652 (-) | True | G298906 |
| TU354086 | lncRNA | downstream | 111052 | 20819372 ~ 20838790 (-) | False | G298906 |
| TU354085 | lncRNA | downstream | 111203 | 20754972 ~ 20838639 (-) | False | G298906 |
| TU354043 | lncRNA | downstream | 219832 | 20724944 ~ 20730010 (-) | True | G298890 |
| XR_003402597.2 | lncRNA | upstream | 66590 | 21016662 ~ 21020147 (-) | True | LOC113524815 |
| TU354201 | lncRNA | upstream | 66636 | 21016708 ~ 21019893 (-) | False | LOC113524815 |
| TU354200 | lncRNA | upstream | 68001 | 21018073 ~ 21018852 (-) | True | LOC113524835 |
| XR_003402600.2 | lncRNA | upstream | 68454 | 21018526 ~ 21018795 (-) | False | LOC113524835 |
| TU354211 | lncRNA | upstream | 72170 | 21022242 ~ 21022860 (-) | True | G299005 |
| XM_026911095.2 | mRNA | downstream | 199702 | 20742070 ~ 20750140 (-) | False | LOC113524743 |
| XM_026911096.2 | mRNA | downstream | 199702 | 20742070 ~ 20750140 (-) | False | LOC113524743 |
| XM_026911097.2 | mRNA | downstream | 200217 | 20742070 ~ 20749625 (-) | True | LOC113524743 |
| XM_034313607.1 | mRNA | downstream | 296630 | 20613722 ~ 20653212 (-) | True | LOC113524752 |
| XM_034313536.1 | mRNA | downstream | 338573 | 20593509 ~ 20611269 (-) | True | LOC113524753 |
| XM_034313470.1 | mRNA | upstream | 35116 | 20985188 ~ 20990671 (-) | True | LOC117595662 |
| XM_034313850.1 | mRNA | upstream | 45729 | 20995801 ~ 20999074 (-) | True | LOC113525589 |
| XM_034313849.1 | mRNA | upstream | 45729 | 20995801 ~ 20997924 (-) | False | LOC113525589 |
| XM_034313675.1 | mRNA | upstream | 143405 | 21093477 ~ 21112429 (-) | True | LOC113524825 |
| XM_034313609.1 | mRNA | upstream | 169876 | 21119948 ~ 21126084 (-) | True | LOC117599722 |
| trnae-uuc_17 | other | downstream | 199271 | 20750500 ~ 20750571 (-) | True | trnae-uuc_17 |
| TU354008 | other | downstream | 285302 | 20655999 ~ 20664540 (-) | True | G298875 |
| TU353922 | other | downstream | 507754 | 20440866 ~ 20442088 (-) | False | LOC117599698 |
| trnae-uuc_16 | other | downstream | 526260 | 20423511 ~ 20423582 (-) | True | trnae-uuc_16 |
| trnae-uuc_15 | other | downstream | 527916 | 20421855 ~ 20421926 (-) | True | trnae-uuc_15 |
| trnai-uau_9 | other | upstream | 7559 | 20957631 ~ 20957723 (-) | True | trnai-uau_9 |
| trnar-ucu_11 | other | upstream | 9424 | 20959496 ~ 20959588 (-) | True | trnar-ucu_11 |
| TU354232 | other | upstream | 122854 | 21072926 ~ 21073676 (-) | True | G299022 |
| trnae-uuc_18 | other | upstream | 260110 | 21210182 ~ 21210253 (-) | True | trnae-uuc_18 |
| trnav-uac_10 | other | upstream | 782117 | 21732189 ~ 21732261 (-) | True | trnav-uac_10 |
