Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU354211 |
| length | 419 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G299005 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 21022242 ~ 21022860 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003402597.2 | lncRNA | downstream | 2095 | 21016662 ~ 21020147 (-) | True | LOC113524815 |
| TU354201 | lncRNA | downstream | 2349 | 21016708 ~ 21019893 (-) | False | LOC113524815 |
| TU354200 | lncRNA | downstream | 3390 | 21018073 ~ 21018852 (-) | True | LOC113524835 |
| XR_003402600.2 | lncRNA | downstream | 3447 | 21018526 ~ 21018795 (-) | False | LOC113524835 |
| TU354114 | lncRNA | downstream | 72170 | 20949842 ~ 20950072 (-) | True | G298934 |
| TU354214 | lncRNA | upstream | 1264 | 21024124 ~ 21029143 (-) | True | G299007 |
| TU354228 | lncRNA | upstream | 45854 | 21068714 ~ 21068938 (-) | True | G299018 |
| TU354229 | lncRNA | upstream | 47977 | 21070837 ~ 21071111 (-) | True | G299019 |
| TU354239 | lncRNA | upstream | 59661 | 21082521 ~ 21082826 (-) | True | G299026 |
| TU354256 | lncRNA | upstream | 92772 | 21115632 ~ 21117306 (-) | False | G299032 |
| XM_034313850.1 | mRNA | downstream | 23168 | 20995801 ~ 20999074 (-) | True | LOC113525589 |
| XM_034313849.1 | mRNA | downstream | 24318 | 20995801 ~ 20997924 (-) | False | LOC113525589 |
| XM_034313470.1 | mRNA | downstream | 31571 | 20985188 ~ 20990671 (-) | True | LOC117595662 |
| XM_026911095.2 | mRNA | downstream | 272102 | 20742070 ~ 20750140 (-) | False | LOC113524743 |
| XM_034313675.1 | mRNA | upstream | 70617 | 21093477 ~ 21112429 (-) | True | LOC113524825 |
| XM_034313609.1 | mRNA | upstream | 97088 | 21119948 ~ 21126084 (-) | True | LOC117599722 |
| XM_034313610.1 | mRNA | upstream | 112717 | 21135577 ~ 21171717 (-) | True | LOC113524826 |
| XM_034313693.1 | mRNA | upstream | 166563 | 21189423 ~ 21197043 (-) | True | LOC113524822 |
| XM_034313691.1 | mRNA | upstream | 197026 | 21219886 ~ 21247185 (-) | True | kcnk10a |
| trnar-ucu_11 | other | downstream | 62654 | 20959496 ~ 20959588 (-) | True | trnar-ucu_11 |
| trnai-uau_9 | other | downstream | 64519 | 20957631 ~ 20957723 (-) | True | trnai-uau_9 |
| trnae-uuc_17 | other | downstream | 271671 | 20750500 ~ 20750571 (-) | True | trnae-uuc_17 |
| TU354008 | other | downstream | 357702 | 20655999 ~ 20664540 (-) | True | G298875 |
| TU353922 | other | downstream | 580154 | 20440866 ~ 20442088 (-) | False | LOC117599698 |
| TU354232 | other | upstream | 50066 | 21072926 ~ 21073676 (-) | True | G299022 |
| trnae-uuc_18 | other | upstream | 187322 | 21210182 ~ 21210253 (-) | True | trnae-uuc_18 |
| trnav-uac_10 | other | upstream | 709329 | 21732189 ~ 21732261 (-) | True | trnav-uac_10 |
| TU354804 | other | upstream | 949221 | 21972081 ~ 22067550 (-) | False | srsf5a |
| TU354827 | other | upstream | 973254 | 21996114 ~ 22000833 (-) | True | G299449 |
