Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU354228 |
| length | 225 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G299018 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 21068714 ~ 21068938 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU354214 | lncRNA | downstream | 39571 | 21024124 ~ 21029143 (-) | True | G299007 |
| TU354211 | lncRNA | downstream | 45854 | 21022242 ~ 21022860 (-) | True | G299005 |
| XR_003402597.2 | lncRNA | downstream | 48567 | 21016662 ~ 21020147 (-) | True | LOC113524815 |
| TU354229 | lncRNA | upstream | 1899 | 21070837 ~ 21071111 (-) | True | G299019 |
| TU354239 | lncRNA | upstream | 13583 | 21082521 ~ 21082826 (-) | True | G299026 |
| TU354256 | lncRNA | upstream | 46694 | 21115632 ~ 21117306 (-) | False | G299032 |
| TU354247 | lncRNA | upstream | 58469 | 21127407 ~ 21132002 (-) | True | G299032 |
| XR_004580112.1 | lncRNA | upstream | 113002 | 21181940 ~ 21185632 (-) | True | LOC117599741 |
| XM_034313850.1 | mRNA | downstream | 69640 | 20995801 ~ 20999074 (-) | True | LOC113525589 |
| XM_034313849.1 | mRNA | downstream | 70790 | 20995801 ~ 20997924 (-) | False | LOC113525589 |
| XM_034313470.1 | mRNA | downstream | 78043 | 20985188 ~ 20990671 (-) | True | LOC117595662 |
| XM_026911095.2 | mRNA | downstream | 318574 | 20742070 ~ 20750140 (-) | False | LOC113524743 |
| XM_034313675.1 | mRNA | upstream | 24539 | 21093477 ~ 21112429 (-) | True | LOC113524825 |
| XM_034313609.1 | mRNA | upstream | 51010 | 21119948 ~ 21126084 (-) | True | LOC117599722 |
| XM_034313610.1 | mRNA | upstream | 66639 | 21135577 ~ 21171717 (-) | True | LOC113524826 |
| XM_034313693.1 | mRNA | upstream | 120485 | 21189423 ~ 21197043 (-) | True | LOC113524822 |
| XM_034313691.1 | mRNA | upstream | 150948 | 21219886 ~ 21247185 (-) | True | kcnk10a |
| trnar-ucu_11 | other | downstream | 109126 | 20959496 ~ 20959588 (-) | True | trnar-ucu_11 |
| trnai-uau_9 | other | downstream | 110991 | 20957631 ~ 20957723 (-) | True | trnai-uau_9 |
| trnae-uuc_17 | other | downstream | 318143 | 20750500 ~ 20750571 (-) | True | trnae-uuc_17 |
| TU354008 | other | downstream | 404174 | 20655999 ~ 20664540 (-) | True | G298875 |
| TU353922 | other | downstream | 626626 | 20440866 ~ 20442088 (-) | False | LOC117599698 |
| TU354232 | other | upstream | 3988 | 21072926 ~ 21073676 (-) | True | G299022 |
| trnae-uuc_18 | other | upstream | 141244 | 21210182 ~ 21210253 (-) | True | trnae-uuc_18 |
| trnav-uac_10 | other | upstream | 663251 | 21732189 ~ 21732261 (-) | True | trnav-uac_10 |
| TU354804 | other | upstream | 903143 | 21972081 ~ 22067550 (-) | False | srsf5a |
| TU354827 | other | upstream | 927176 | 21996114 ~ 22000833 (-) | True | G299449 |
