Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026944583.2 |
| length | 1078 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 5 |
| gene id | aqp4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 6622927 ~ 6629974 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0006833 | water transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005372 | water transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K09866 | AQP4; aquaporin-4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU344600 | lncRNA | upstream | 199961 | 6422672 ~ 6422966 (+) | True | G290879 |
| TU344584 | lncRNA | upstream | 280387 | 6342263 ~ 6342540 (+) | True | G290863 |
| TU344375 | lncRNA | upstream | 385011 | 6237714 ~ 6237916 (+) | True | G290699 |
| TU344338 | lncRNA | upstream | 462887 | 6135952 ~ 6160040 (+) | False | b4galt6 |
| XR_004580162.1 | lncRNA | upstream | 803861 | 5815909 ~ 5819066 (+) | True | LOC117599801 |
| TU344666 | lncRNA | downstream | 83953 | 6713927 ~ 6727514 (+) | True | G290935 |
| TU344782 | lncRNA | downstream | 204433 | 6834407 ~ 6834698 (+) | True | G291037 |
| XR_004580109.1 | lncRNA | downstream | 300395 | 6930369 ~ 6933860 (+) | False | LOC117599731 |
| XR_004580108.1 | lncRNA | downstream | 300401 | 6930375 ~ 6933860 (+) | False | LOC117599731 |
| XR_004580107.1 | lncRNA | downstream | 300404 | 6930378 ~ 6933860 (+) | True | LOC117599731 |
| XM_026944591.2 | mRNA | upstream | 118796 | 6461728 ~ 6504131 (+) | True | cdh2 |
| XM_026944489.2 | mRNA | upstream | 392375 | 6214741 ~ 6230552 (+) | True | dsc2l |
| XM_026944686.2 | mRNA | upstream | 466163 | 6135920 ~ 6156764 (+) | True | b4galt6 |
| XM_026944683.2 | mRNA | upstream | 495025 | 6090426 ~ 6127902 (+) | False | trappc8 |
| XM_026944352.2 | mRNA | downstream | 10993 | 6640967 ~ 6660584 (+) | False | kctd1 |
| XM_026944351.2 | mRNA | downstream | 19409 | 6649383 ~ 6660584 (+) | True | kctd1 |
| XM_026944412.2 | mRNA | downstream | 31906 | 6661880 ~ 6676354 (+) | True | taf4b |
| XM_034313819.1 | mRNA | downstream | 61660 | 6691634 ~ 6699817 (+) | False | LOC113545329 |
| XM_026944644.2 | mRNA | downstream | 61662 | 6691636 ~ 6699817 (+) | True | LOC113545329 |
| XR_004580141.1 | other | upstream | 821234 | 5735473 ~ 5801693 (+) | True | usp24 |
| XR_004580098.1 | other | upstream | 1643527 | 4941951 ~ 4979400 (+) | False | dnm3a |
| XR_004580167.1 | other | downstream | 382768 | 7012742 ~ 7019686 (+) | False | tdh |
| trnac-gca_25 | other | downstream | 959394 | 7589368 ~ 7589439 (+) | True | trnac-gca_25 |
| trnaa-cgc_5 | other | downstream | 1253244 | 7883218 ~ 7883289 (+) | True | trnaa-cgc_5 |
| trnaa-cgc_6 | other | downstream | 1254671 | 7884645 ~ 7884716 (+) | True | trnaa-cgc_6 |
| trnaa-ugc_17 | other | downstream | 1257554 | 7887528 ~ 7887599 (+) | True | trnaa-ugc_17 |
