Item | Value |
---|---|
RNA id | XM_026944635.2 |
length | 3857 |
RNA type | mRNA |
GC content | 0.50 |
exon number | 15 |
gene id | dab1a |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047613.1 |
NCBI id | CM018559.1 |
chromosome length | 22090854 |
location | 5327165 ~ 5502404 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
XR_003404604.2 | lncRNA | upstream | 35425 | 5302630 ~ 5306902 (+) | True | LOC113545370 |
TU343799 | lncRNA | upstream | 88604 | 5253517 ~ 5253723 (+) | True | G290192 |
XR_004580165.1 | lncRNA | upstream | 191402 | 5147185 ~ 5150925 (+) | True | LOC117599804 |
TU343587 | lncRNA | upstream | 434515 | 4898967 ~ 4907812 (+) | False | G290030 |
TU343586 | lncRNA | upstream | 441979 | 4898967 ~ 4900348 (+) | True | G290030 |
TU344029 | lncRNA | downstream | 41714 | 5544118 ~ 5599007 (+) | True | G290417 |
XR_004580164.1 | lncRNA | downstream | 77414 | 5579818 ~ 5588495 (+) | True | LOC117599803 |
TU344031 | lncRNA | downstream | 144973 | 5647377 ~ 5655687 (+) | True | G290419 |
TU344180 | lncRNA | downstream | 230327 | 5732731 ~ 5734300 (+) | True | G290562 |
TU344187 | lncRNA | downstream | 299394 | 5801798 ~ 5804340 (+) | True | G290566 |
XM_034313881.1 | mRNA | upstream | 244850 | 5079221 ~ 5097477 (+) | True | oma1 |
XM_026944478.2 | mRNA | upstream | 264409 | 5066310 ~ 5077918 (+) | True | mysm1 |
XM_026944660.2 | mRNA | upstream | 278178 | 5052030 ~ 5064149 (+) | True | scrn2 |
XM_034313409.1 | mRNA | upstream | 293885 | 4998148 ~ 5048442 (+) | False | suco |
XM_034313904.1 | mRNA | downstream | 3435 | 5505839 ~ 5520633 (+) | True | LOC113545193 |
XM_026944339.1 | mRNA | downstream | 40552 | 5542956 ~ 5575570 (+) | True | plpp3 |
XM_026944340.1 | mRNA | downstream | 40552 | 5542956 ~ 5574980 (+) | False | plpp3 |
XM_026944585.2 | mRNA | downstream | 233070 | 5735474 ~ 5801693 (+) | False | usp24 |
XM_026944586.2 | mRNA | downstream | 233070 | 5735474 ~ 5801693 (+) | False | usp24 |
XR_004580098.1 | other | upstream | 362927 | 4941951 ~ 4979400 (+) | False | dnm3a |
XR_004580099.1 | other | upstream | 362927 | 4941952 ~ 4979400 (+) | False | dnm3a |
XR_004580101.1 | other | upstream | 363472 | 4941951 ~ 4978855 (+) | False | dnm3a |
XR_004580100.1 | other | upstream | 368266 | 4941951 ~ 4974061 (+) | False | dnm3a |
trnad-guc_22 | other | upstream | 992448 | 4349808 ~ 4349879 (+) | True | trnad-guc_22 |
XR_004580141.1 | other | downstream | 233069 | 5735473 ~ 5801693 (+) | True | usp24 |
XR_004580167.1 | other | downstream | 1510338 | 7012742 ~ 7019686 (+) | False | tdh |
trnac-gca_25 | other | downstream | 2086964 | 7589368 ~ 7589439 (+) | True | trnac-gca_25 |
trnaa-cgc_5 | other | downstream | 2380814 | 7883218 ~ 7883289 (+) | True | trnaa-cgc_5 |
trnaa-cgc_6 | other | downstream | 2382241 | 7884645 ~ 7884716 (+) | True | trnaa-cgc_6 |