Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026944673.2 |
| length | 1252 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 10 |
| gene id | sirt5 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 5875188 ~ 5887559 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0036047 | peptidyl-lysine demalonylation | biological_process |
| GO:0036049 | peptidyl-lysine desuccinylation | biological_process |
| GO:0006476 | protein deacetylation | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0036054 | protein-malonyllysine demalonylase activity | molecular_function |
| GO:0036055 | protein-succinyllysine desuccinylase activity | molecular_function |
| GO:0003950 | NAD+ ADP-ribosyltransferase activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| GO:0070403 | NAD+ binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004580161.1 | lncRNA | upstream | 56122 | 5815902 ~ 5819066 (+) | False | LOC117599801 |
| XR_004580162.1 | lncRNA | upstream | 56122 | 5815909 ~ 5819066 (+) | True | LOC117599801 |
| TU344190 | lncRNA | upstream | 67272 | 5807006 ~ 5807916 (+) | True | G290569 |
| TU344188 | lncRNA | upstream | 69600 | 5804676 ~ 5805588 (+) | True | G290567 |
| TU344187 | lncRNA | upstream | 70848 | 5801798 ~ 5804340 (+) | True | G290566 |
| TU344338 | lncRNA | downstream | 248393 | 6135952 ~ 6160040 (+) | False | b4galt6 |
| TU344375 | lncRNA | downstream | 350155 | 6237714 ~ 6237916 (+) | True | G290699 |
| TU344584 | lncRNA | downstream | 454704 | 6342263 ~ 6342540 (+) | True | G290863 |
| TU344600 | lncRNA | downstream | 535113 | 6422672 ~ 6422966 (+) | True | G290879 |
| TU344666 | lncRNA | downstream | 826368 | 6713927 ~ 6727514 (+) | True | G290935 |
| XM_026944354.2 | mRNA | upstream | 7175 | 5863591 ~ 5868013 (+) | False | si:ch211-121a2.4 |
| XM_034313792.1 | mRNA | upstream | 7175 | 5863795 ~ 5868013 (+) | True | si:ch211-121a2.4 |
| XM_034313451.1 | mRNA | upstream | 18632 | 5844033 ~ 5856556 (+) | False | dhcr24 |
| XM_026944360.2 | mRNA | upstream | 18632 | 5844033 ~ 5856556 (+) | True | dhcr24 |
| XM_026944357.2 | mRNA | upstream | 18632 | 5844034 ~ 5856556 (+) | False | dhcr24 |
| XM_034313459.1 | mRNA | downstream | 17135 | 5904694 ~ 5945486 (+) | True | adcy1a |
| XM_026944389.2 | mRNA | downstream | 17462 | 5905021 ~ 5945486 (+) | False | adcy1a |
| XM_026944681.2 | mRNA | downstream | 70872 | 5958431 ~ 5961185 (+) | True | igfbp1a |
| XM_026944687.2 | mRNA | downstream | 181048 | 6068607 ~ 6075045 (+) | True | mcm3l |
| XM_026944689.2 | mRNA | downstream | 182065 | 6069624 ~ 6075045 (+) | False | mcm3l |
| XR_004580141.1 | other | upstream | 73495 | 5735473 ~ 5801693 (+) | True | usp24 |
| XR_004580098.1 | other | upstream | 895788 | 4941951 ~ 4979400 (+) | False | dnm3a |
| XR_004580167.1 | other | downstream | 1125183 | 7012742 ~ 7019686 (+) | False | tdh |
| trnac-gca_25 | other | downstream | 1701809 | 7589368 ~ 7589439 (+) | True | trnac-gca_25 |
| trnaa-cgc_5 | other | downstream | 1995659 | 7883218 ~ 7883289 (+) | True | trnaa-cgc_5 |
| trnaa-cgc_6 | other | downstream | 1997086 | 7884645 ~ 7884716 (+) | True | trnaa-cgc_6 |
| trnaa-ugc_17 | other | downstream | 1999969 | 7887528 ~ 7887599 (+) | True | trnaa-ugc_17 |
