Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026946830.2 |
| length | 820 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 6 |
| gene id | ociad2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 3258173 ~ 3262050 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU342216 | lncRNA | upstream | 64243 | 3192107 ~ 3193930 (+) | True | G288927 |
| TU342119 | lncRNA | upstream | 277968 | 2978333 ~ 2980205 (+) | True | G288839 |
| TU342114 | lncRNA | upstream | 341363 | 2869596 ~ 2916810 (+) | True | G288834 |
| TU342116 | lncRNA | upstream | 387507 | 2870362 ~ 2870666 (+) | True | G288836 |
| TU342050 | lncRNA | upstream | 493118 | 2764270 ~ 2765055 (+) | True | G288789 |
| TU342467 | lncRNA | downstream | 17356 | 3279406 ~ 3288541 (+) | True | G289121 |
| TU342480 | lncRNA | downstream | 79351 | 3341401 ~ 3343744 (+) | True | G289134 |
| XR_003404747.2 | lncRNA | downstream | 102178 | 3364228 ~ 3368671 (+) | False | LOC113546783 |
| XR_003404745.2 | lncRNA | downstream | 102180 | 3364230 ~ 3368671 (+) | True | LOC113546783 |
| TU342493 | lncRNA | downstream | 102188 | 3364238 ~ 3369854 (+) | False | G289145 |
| XM_026946890.2 | mRNA | upstream | 113439 | 3142883 ~ 3144734 (+) | True | zar1 |
| XM_026946889.2 | mRNA | upstream | 116456 | 3135733 ~ 3141717 (+) | True | slc10a4 |
| XM_026946905.2 | mRNA | upstream | 130053 | 3101394 ~ 3128120 (+) | True | slain2 |
| XM_026946945.2 | mRNA | downstream | 1897 | 3263947 ~ 3277968 (+) | True | dcun1d4 |
| XM_034313815.1 | mRNA | downstream | 1944 | 3263994 ~ 3277968 (+) | False | dcun1d4 |
| XM_034313814.1 | mRNA | downstream | 4832 | 3266882 ~ 3277968 (+) | False | dcun1d4 |
| XM_026946968.2 | mRNA | downstream | 43003 | 3305053 ~ 3314463 (+) | True | spata18 |
| XM_026946820.2 | mRNA | downstream | 137065 | 3399115 ~ 3402675 (+) | True | rasl11b |
| TU341918 | other | upstream | 762121 | 2489677 ~ 2496052 (+) | True | cnstb |
| XR_004580079.1 | other | upstream | 1116536 | 2133158 ~ 2141637 (+) | False | LOC113546780 |
| TU341376 | other | upstream | 1249367 | 1996797 ~ 2008806 (+) | False | ptchd4 |
| TU341023 | other | upstream | 1898811 | 1358186 ~ 1359362 (+) | False | srp9 |
| XR_004580082.1 | other | upstream | 1993541 | 1259176 ~ 1264632 (+) | False | LOC117599677 |
| XR_003404755.1 | other | downstream | 103228 | 3365278 ~ 3365402 (+) | True | LOC113546887 |
| XR_003404754.1 | other | downstream | 105598 | 3367648 ~ 3367772 (+) | True | LOC113546886 |
| XR_004580118.1 | other | downstream | 681445 | 3943495 ~ 3979785 (+) | False | ipo13 |
| trnad-guc_14 | other | downstream | 726002 | 3988052 ~ 3988123 (+) | True | trnad-guc_14 |
| TU342966 | other | downstream | 801585 | 4063635 ~ 4069715 (+) | False | G289531 |
