Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034313927.1 |
| length | 665 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 6 |
| gene id | mgst3a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 3897015 ~ 3901866 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0005635 | nuclear envelope | cellular_component |
| GO:0004602 | glutathione peroxidase activity | molecular_function |
| GO:0004364 | glutathione transferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU342784 | lncRNA | upstream | 52403 | 3843115 ~ 3844679 (+) | True | G289378 |
| TU342764 | lncRNA | upstream | 157868 | 3710701 ~ 3739214 (+) | True | G289363 |
| TU342751 | lncRNA | upstream | 209166 | 3623064 ~ 3687916 (+) | True | G289351 |
| TU342605 | lncRNA | upstream | 402748 | 3493951 ~ 3494334 (+) | True | G289240 |
| TU342523 | lncRNA | upstream | 513200 | 3383677 ~ 3383882 (+) | True | G289164 |
| TU342935 | lncRNA | downstream | 40408 | 3942274 ~ 3974015 (+) | True | G289515 |
| TU342939 | lncRNA | downstream | 46330 | 3948196 ~ 3948458 (+) | True | G289517 |
| TU342945 | lncRNA | downstream | 82881 | 3984747 ~ 4350564 (+) | True | G289522 |
| TU342978 | lncRNA | downstream | 145343 | 4047209 ~ 4055985 (+) | True | G289533 |
| TU342965 | lncRNA | downstream | 152591 | 4054457 ~ 4069715 (+) | False | G289531 |
| XM_034313897.1 | mRNA | upstream | 11421 | 3878822 ~ 3885661 (+) | True | LOC117599795 |
| XM_026946915.2 | mRNA | upstream | 88333 | 3781390 ~ 3808749 (+) | True | kita |
| XM_026946916.2 | mRNA | upstream | 88333 | 3781390 ~ 3808749 (+) | False | kita |
| XM_026946917.2 | mRNA | upstream | 88333 | 3781390 ~ 3808749 (+) | False | kita |
| XM_026946931.2 | mRNA | upstream | 145988 | 3733913 ~ 3751094 (+) | False | pdgfra |
| XM_034313657.1 | mRNA | downstream | 3828 | 3905694 ~ 3917080 (+) | True | LOC113546823 |
| XM_026946899.2 | mRNA | downstream | 3926 | 3905792 ~ 3917080 (+) | False | LOC113546823 |
| XM_026946902.2 | mRNA | downstream | 41628 | 3943494 ~ 3976740 (+) | False | ipo13 |
| XM_026946901.2 | mRNA | downstream | 41631 | 3943497 ~ 3982694 (+) | True | ipo13 |
| XM_026946977.2 | mRNA | downstream | 89801 | 3991667 ~ 4016550 (+) | True | pfas |
| XR_003404754.1 | other | upstream | 529310 | 3367648 ~ 3367772 (+) | True | LOC113546886 |
| XR_003404755.1 | other | upstream | 531680 | 3365278 ~ 3365402 (+) | True | LOC113546887 |
| TU341918 | other | upstream | 1401030 | 2489677 ~ 2496052 (+) | True | cnstb |
| XR_004580079.1 | other | upstream | 1755445 | 2133158 ~ 2141637 (+) | False | LOC113546780 |
| TU341376 | other | upstream | 1888276 | 1996797 ~ 2008806 (+) | False | ptchd4 |
| XR_004580118.1 | other | downstream | 41629 | 3943495 ~ 3979785 (+) | False | ipo13 |
| trnad-guc_14 | other | downstream | 86186 | 3988052 ~ 3988123 (+) | True | trnad-guc_14 |
| TU342966 | other | downstream | 161769 | 4063635 ~ 4069715 (+) | False | G289531 |
| trnad-guc_16 | other | downstream | 425605 | 4327471 ~ 4327542 (+) | True | trnad-guc_16 |
| trnad-guc_17 | other | downstream | 426966 | 4328832 ~ 4328903 (+) | False | trnad-guc_17 |
