Item | Value |
---|---|
RNA id | XM_034313652.1 |
length | 1292 |
RNA type | mRNA |
GC content | 0.48 |
exon number | 7 |
gene id | LOC117599727 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047613.1 |
NCBI id | CM018559.1 |
chromosome length | 22090854 |
location | 10170792 ~ 10186791 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU347278 | lncRNA | upstream | 106781 | 10063765 ~ 10064011 (+) | True | G293110 |
TU347253 | lncRNA | upstream | 132437 | 10036451 ~ 10038355 (+) | True | G293095 |
TU347065 | lncRNA | upstream | 302183 | 9868149 ~ 9868609 (+) | True | G292929 |
TU346860 | lncRNA | upstream | 554201 | 9613425 ~ 9616591 (+) | True | G292754 |
TU346862 | lncRNA | upstream | 558180 | 9611988 ~ 9612612 (+) | True | G292756 |
XR_004580103.1 | lncRNA | downstream | 12241 | 10198849 ~ 10210998 (+) | True | LOC117599717 |
TU347561 | lncRNA | downstream | 350356 | 10536964 ~ 10537640 (+) | True | G293350 |
TU347551 | lncRNA | downstream | 365633 | 10552241 ~ 10553007 (+) | True | G293345 |
TU347592 | lncRNA | downstream | 374189 | 10560797 ~ 10561016 (+) | True | G293380 |
TU347623 | lncRNA | downstream | 423018 | 10609626 ~ 10609846 (+) | True | G293411 |
XM_034313908.1 | mRNA | upstream | 53 | 10159027 ~ 10170739 (+) | True | LOC117599798 |
XM_026944413.2 | mRNA | upstream | 30456 | 10136989 ~ 10140336 (+) | True | LOC113545207 |
XM_026944512.2 | mRNA | upstream | 49492 | 10091369 ~ 10121300 (+) | True | exoc2 |
XM_026944679.2 | mRNA | upstream | 144868 | 9945790 ~ 10025924 (+) | False | gmds |
XM_026923687.2 | mRNA | downstream | 179560 | 10366168 ~ 10374001 (+) | False | katnbl1 |
XM_026923688.2 | mRNA | downstream | 179843 | 10366451 ~ 10374001 (+) | True | katnbl1 |
XM_026923689.2 | mRNA | downstream | 180826 | 10367434 ~ 10374001 (+) | False | katnbl1 |
XM_026922696.2 | mRNA | downstream | 187955 | 10374563 ~ 10378224 (+) | True | emc7 |
XM_026923090.2 | mRNA | downstream | 197056 | 10383664 ~ 10412148 (+) | True | aven |
TU347333 | other | upstream | 9041 | 10158955 ~ 10161751 (+) | False | LOC117599798 |
TU347160 | other | upstream | 220061 | 9903750 ~ 9950731 (+) | True | G293016 |
XR_004580138.1 | other | upstream | 1009891 | 9074028 ~ 9160901 (+) | False | LOC113545247 |
TU346212 | other | upstream | 1173796 | 8993513 ~ 8996996 (+) | True | G292216 |
trnak-uuu_18 | other | upstream | 1279052 | 8891668 ~ 8891740 (+) | True | trnak-uuu_18 |
TU347771 | other | downstream | 832308 | 11018916 ~ 11024973 (+) | False | G293528 |
trnai-aau_1 | other | downstream | 957279 | 11143887 ~ 11143960 (+) | True | trnai-aau_1 |
trnai-aau_2 | other | downstream | 958331 | 11144939 ~ 11145012 (+) | True | trnai-aau_2 |
trnai-aau_3 | other | downstream | 959383 | 11145991 ~ 11146064 (+) | True | trnai-aau_3 |
trnai-aau_4 | other | downstream | 960426 | 11147034 ~ 11147107 (+) | True | trnai-aau_4 |