RNA id: XM_034313663.1


Basic Information

Item Value
RNA id XM_034313663.1
length 3767
RNA type mRNA
GC content 0.52
exon number 16
gene id enah
representative True

Chromosome Information

Item Value
chromosome id NC_047613.1
NCBI id CM018559.1
chromosome length 22090854
location 1824985 ~ 1889193 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

CCTTGCAGAGCAGTCAGACTGCTAACTGAACGCAGCTCACTTAGAGACACAGGAGACAGTGAGTCAGGAAGACATTCTTCTCACAGGTGGAGGTTTAGAGGAATGCAGCGATGACACGTGATGCTGAGCAGAGTATCTGTCAGGCACGGGCTGCCGTCATGGTGTATGACGACACCAACAAGAAATGGGTTCCGGCTGGAGGTTCCACGGGTTTCAGCAGAGTCCACATCTATCACCATACGGGGAACAACGCGTTCCGGGTGGTGGGCCGCAAAATTCAGGACCACCAGGTGGTGATAAACTGTGCCATTCCCAAGGGGCTGAAATATAACCAGGCAACACTGACTTTCCATCAGTGGCGCGATGCACGGCAGGTGTACGGCCTTAACTTTGGCAGCAAGGAGGATGCTAACGTATTTGCCAGTGCCATGATGCATGCTCTGGAGGTGCTCAACTCTCAGGATGCAGGTCCCACGTTGCCAAGACAGAGCCCTCAGGTGCAGAATGGACCCTCGCCAGAGGAGCTGGAAATGCAGAGACGGCAGCTGCAGGAGCTGCAGCGTCAGAAGGAGCTAGAACGTGAGCGGCTTGAACGAGAACGTCAGGAGCGAGAGCGGCTGGAGCGTGAGCGTCTTGAGCATGAACGTCAGGAACGTGAGCGTGAGCGGTTGGAACGGGAGTTGCTGGAGCGCGAGCATCAGGAGCGTGAGCGCCAGGAACGGGAGCGCATGGAGAGAGACCGTGCAGAGCAGGAGCGTCTGGAGAGGTTGGAGCAGGAGCGCCAGGAGCAGCTGGAGCGCGAGCGTGCTGAATGCGAGCGGCTGGAGCGCGAGCGTGCTGACAGGGAAAGGCAGGAGAGGGAGCACCGGgagcagatagacagagaggaCTCGGACAGAGGACGACGCATCTCCAATGCTGCCTTTGAAAGTACCCTCCACACCCCTCCACCTCCAGACTGCAACAAGAGCTCTGCCTCTTCTTCACCCGTATCCCCTTCCACCCCCAATTAccctcctccttcttcctcACCCTCTGTAGTTCCGCCTCCCACCCCTCCCCTGCGCCACTCTGCCTCTCGTTTTGCCACTTCGAAAGGCTCTGCCTTCCACCCAGTCCTACCTCATTATGCCACCATACCCCGGCGGCATCCAGCTCAGCCCACACCCACGGCTCTGCCTCCTGCCCCAGCTTCCAAAACAGTGGTCTGCCAGTCCACCAATTTCACGCCCTTACCGCCATCGCCTCCAGTCATGATCAGCAGCCCCCCTGGCAAAGCCACCGGCCCTCGGCCTGTCATTGCTGTTCCAGCCTCCAGCCCTCTTTTCTCCTCCTCACCCACAGCACCCAATGGGCCTCCAGTCACCACTCAATACCATGCCTCTTCCCCAATCTTGGGCCAGCCCCTTCCATCACCCCCAACTCCACCCCTGCCTTCTCACTCTTTTCCTCAATTCACCACCCCCATGACCCCCTATGTGTCCTGTCCATCCACCCAGCCTCCTGTTGTCCCCTCTCCTTCTACAGCCTGCCCTGCCAATGCTGATTGCTCTGTAAACTCGGTGCTGGGAGACTCCTCTGCTCCAGAGCCGGGTAAGgcctcttctctctgtctctctgcctccaCTAACCCACTAAACCAAGAAGGGGTGTTGCTGTCCCCACCCCCGCCTCCTCCACCCCCTCTCCCACCCGGCTCCACTGTGACCCCAACTTCTGCTGGAGCCCCTCCCCCTCCTGGTCCACCTCCGCCTCCCCCTCTCCCCACCACACTTACTCCCACAGGTCCGCCTCCTCCCCCTGGaccacctccacctccctcCGGCCAGGTCCcgcctcctgctcctcctccacctccagcGCCACCTCTGCCCTCTGGTCTTTTTACTCCCTCACCCACTGGCGATGACAACAAACCGTTGTCCGGCCTGGCAGCTGCCCTTGCAGGCGCCAAGTTACGGAAAGTGTCGAGGAATGAAGAGCCCTCTAGTGCATCTGTTGGAGGTGTGGTGGCTCCCAGTGCTGCCAAGCCCGAGGCTGCCAGAGGAAATGGTCCTCtggctggaggaggaggactCATGGAGGAGATGAGCGCCCTACTTGCCAGGAGAAGAAGGATCGCAGAGAAAGGATCATCACCAGAGCCTGAGCAGAAAACGGAAGAAATCGAAGCAACCATTACTCCAAAATTGTCAGCCTGTAGCACACCAGACATGCCCAGAAAGCCATGGGAAAGGACAAACACCATAAATGGTAGCAAATCACCAGTTATTGGAAGACGGGATGCACCATGGAGAAATCAGATGAGTACTGAAAAGTACTGTGATTCCTTAAACAGgCCAAGGTCTACACCCACTCCTACTGGATCCCTAAGTGCCAATGGAGTGCCAACAGAAACTCTGGACTACGATAGATTGAAACAGgaCATACTGGATGAGATGAGGAAGGAACTGTCAAAGCTGAAAGAAGAACTTATTGATGCGATCAGGGAGGAGTTGGGCAAGTCCAACTCTGCATAGGAGACCATGACTCCCCAACTATTTCCCAACCATGGTCCATCACTCAAGGCCAGCTTCAGTTCTGACACTTTCTAAAAATGCAGCGGTAATGGACAttttacaaaagcattttaaactcGTGGTGATAACAATAACCATGTTAATTCCGAAGAAGCGTTTGATGGCGATGCCATTTTAGGGCTACAAGTACCAAGAAGAGATGCCATAGGTGTGATTTCAGGCTGTGGAATTTCCCTCAATGTTCCAGCTAGGGGTGCGATGCAGCCTTTCTAAAGAAGTGACTGTCAATATGCAAAAGATTACTCTATCATAGAAAGATGAGCAATCGTTTTGAGGGAAAACACAACCTATTACTGAACTCTATACTGTATTAATCATTGAAGAGTGACTGTATTTTCCAGCAGGTTACGTTCATTATTTGGCACATTTGCTTAGCAAAGGGCAGTCCTGTTTGGTCAGATTAGCGTGAAGTAGAGCTTAGCTTAGCTCAGCTTGCTTTGCAGCATTGAGGAAAACTTTTAGAGTCAGGCCAAACAAGCAGCTGAAGGACTGGGTGTAGTTTCTTGCTGCAGGACTTTGTAAAGCTCGTCTTCCTGATATCATTATAATCCGAGTATGTACTTTAAGACAGAATAGATATTCTTCAACTCATTTAATTATGTCTGTTCTAATATATTCCATGGCCATATGAAGTAGCTTAGTCACGCAATCTTGGGATAATCAGTCTTGGTAAATACCCAGGTACATTCAGAGATGAATGCTCAAAAGTCTGTCTCATAAACCACTGTTCGCCATTAATTACCTTTGTCTTGTATGTGGGGAAAATGGTTTGGAATGATCGGGTGAGATGATGCCTCTCTACTGTAATTCATTGTAGCTTTTTACCAAATCCTCTCAGTCAAAATGATGGGTGAATGCCAATATCAACAAGACCGCATCTGTAGATAGTGCTAACAactagcctctttttttttgtttcttggtCCACTGCAGGCTCTTCTCttatttcttttgattttagTGCATGTCTTGTTCTGAATGCTATGGGACATCTTGCTGCCACGAAAAAgaaattgtttattgttttcaaTTTATAAGCAATAAGTGTAGCACTGACACTCGGTTTTCCTCCCCATGTGCGTTTCCTTATTTTCTGTAATCATCTATTACCCCAGTcggtgaatgagtgaatgagggaGTGTTTTTAAACTGCACACAAGTTTTTGtctaataaactgtaaacatggA

Function

GO: NA

KEGG:

id description
K05746 ENAH, MENA; enabled

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU341325 lncRNA upstream 126818 1695908 ~ 1698167 (+) True G288171
TU341277 lncRNA upstream 226392 1598391 ~ 1598593 (+) True G288134
XR_004580120.1 lncRNA upstream 257668 1566196 ~ 1567317 (+) True LOC117599747
TU341168 lncRNA upstream 349536 1473930 ~ 1475449 (+) True G288048
TU341167 lncRNA upstream 351888 1472713 ~ 1473097 (+) True G288047
TU341357 lncRNA downstream 45384 1934577 ~ 1934783 (+) True G288192
TU341372 lncRNA downstream 106267 1995460 ~ 1995679 (+) True G288207
TU341398 lncRNA downstream 137676 2026869 ~ 2028706 (+) True G288225
TU341394 lncRNA downstream 138150 2027343 ~ 2073881 (+) False G288225
TU341415 lncRNA downstream 181841 2071034 ~ 2071276 (+) True G288242
XM_026946962.2 mRNA upstream 24067 1786487 ~ 1800918 (+) True ppil6
XM_026946836.2 mRNA upstream 43708 1761934 ~ 1781277 (+) True ak9
XM_026946973.2 mRNA downstream 3576 1892769 ~ 1901993 (+) False lbr
XM_026946971.2 mRNA downstream 3577 1892770 ~ 1901993 (+) True lbr
XM_026946972.2 mRNA downstream 3908 1893101 ~ 1901993 (+) False lbr
XM_034313894.1 mRNA downstream 23421 1912614 ~ 1915860 (+) True si:dkey-1j5.4
XM_026946831.2 mRNA downstream 106927 1996120 ~ 2021263 (+) True ptchd4
TU341023 other upstream 465623 1358186 ~ 1359362 (+) False srp9
XR_004580082.1 other upstream 560353 1259176 ~ 1264632 (+) False LOC117599677
TU340986 other upstream 581313 1243057 ~ 1243672 (+) True G287892
TU340615 other upstream 932977 812277 ~ 892008 (+) True G287628
TU340641 other upstream 1003924 807193 ~ 821061 (+) True LOC117599757
TU341376 other downstream 107604 1996797 ~ 2008806 (+) False ptchd4
XR_004580079.1 other downstream 243965 2133158 ~ 2141637 (+) False LOC113546780
TU341918 other downstream 600484 2489677 ~ 2496052 (+) True cnstb
XR_003404755.1 other downstream 1476085 3365278 ~ 3365402 (+) True LOC113546887
XR_003404754.1 other downstream 1478455 3367648 ~ 3367772 (+) True LOC113546886

Expression Profile