Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117599444 |
| length | 379 |
| RNA type | V_segment |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC117599444 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 4554619 ~ 4555095 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU327891 | lncRNA | downstream | 51757 | 4449882 ~ 4502862 (-) | True | G276570 |
| TU327796 | lncRNA | downstream | 71625 | 4429498 ~ 4482994 (-) | False | G276503 |
| TU327896 | lncRNA | downstream | 72054 | 4466273 ~ 4482565 (-) | False | LOC117599578 |
| TU327783 | lncRNA | downstream | 130077 | 4358625 ~ 4424542 (-) | True | G276503 |
| TU327870 | lncRNA | downstream | 139503 | 4400123 ~ 4415116 (-) | True | G276556 |
| TU328119 | lncRNA | upstream | 243564 | 4798659 ~ 4799157 (-) | True | G276749 |
| TU328127 | lncRNA | upstream | 246812 | 4801907 ~ 4844371 (-) | True | G276755 |
| TU328136 | lncRNA | upstream | 262013 | 4817108 ~ 4841754 (-) | False | G276761 |
| TU328138 | lncRNA | upstream | 262013 | 4817108 ~ 4876792 (-) | False | G276761 |
| TU328142 | lncRNA | upstream | 262013 | 4817108 ~ 4862107 (-) | True | G276761 |
| XM_026909919.2 | mRNA | downstream | 211074 | 4331260 ~ 4343545 (-) | False | LOC113523868 |
| XM_034312956.1 | mRNA | downstream | 211074 | 4331260 ~ 4343545 (-) | True | LOC113523868 |
| XM_026909970.2 | mRNA | downstream | 494105 | 4044706 ~ 4060514 (-) | True | cd36 |
| XM_034313185.1 | mRNA | downstream | 609318 | 3919302 ~ 3945301 (-) | True | kdm7aa |
| XM_034313181.1 | mRNA | downstream | 647966 | 3857515 ~ 3906653 (-) | True | kmt2e |
| XM_026912198.2 | mRNA | upstream | 229033 | 4784128 ~ 4792797 (-) | True | psmc2 |
| XM_026922701.2 | mRNA | upstream | 342175 | 4897270 ~ 4917780 (-) | True | gys2 |
| XM_026922781.2 | mRNA | upstream | 370621 | 4925716 ~ 4938813 (-) | True | ldhba |
| XM_034313267.1 | mRNA | upstream | 399196 | 4954291 ~ 4965093 (-) | False | slc25a3a |
| XM_034313265.1 | mRNA | upstream | 399196 | 4954291 ~ 4965093 (-) | True | slc25a3a |
| LOC117599576 | other | downstream | 9465 | 4544541 ~ 4545154 (-) | True | LOC117599576 |
| TU327793 | other | downstream | 9488 | 4538234 ~ 4545131 (-) | False | G276503 |
| LOC117599582 | other | downstream | 15795 | 4527788 ~ 4538824 (-) | True | LOC117599582 |
| LOC117599579 | other | downstream | 35636 | 4517902 ~ 4518983 (-) | True | LOC117599579 |
| LOC113525246 | other | downstream | 40002 | 4513931 ~ 4514617 (-) | True | LOC113525246 |
| LOC117599581 | other | upstream | 21375 | 4576470 ~ 4577038 (-) | True | LOC117599581 |
| LOC117599580 | other | upstream | 31161 | 4586256 ~ 4586992 (-) | True | LOC117599580 |
| TU327987 | other | upstream | 179836 | 4734931 ~ 4738999 (-) | True | G276650 |
| XR_004579951.1 | other | upstream | 413158 | 4968253 ~ 4984315 (-) | False | tmpoa |
| TU328176 | other | upstream | 415219 | 4970314 ~ 4972245 (-) | False | tmpoa |
