Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117599555 |
| length | 739 |
| RNA type | V_segment |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC117599555 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 4357539 ~ 4457121 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU327859 | lncRNA | downstream | 22995 | 4333555 ~ 4334544 (-) | False | LOC113523868 |
| TU327824 | lncRNA | downstream | 34858 | 4278059 ~ 4322681 (-) | False | G276515 |
| TU327822 | lncRNA | downstream | 34858 | 4320491 ~ 4322681 (-) | True | G276515 |
| TU327849 | lncRNA | downstream | 48502 | 4308588 ~ 4309037 (-) | True | G276538 |
| TU327765 | lncRNA | downstream | 101595 | 4255200 ~ 4255944 (-) | True | G276497 |
| TU327896 | lncRNA | upstream | 9152 | 4466273 ~ 4482565 (-) | False | LOC117599578 |
| TU328119 | lncRNA | upstream | 341538 | 4798659 ~ 4799157 (-) | True | G276749 |
| TU328127 | lncRNA | upstream | 344786 | 4801907 ~ 4844371 (-) | True | G276755 |
| TU328136 | lncRNA | upstream | 359987 | 4817108 ~ 4841754 (-) | False | G276761 |
| TU328138 | lncRNA | upstream | 359987 | 4817108 ~ 4876792 (-) | False | G276761 |
| XM_026909919.2 | mRNA | downstream | 13994 | 4331260 ~ 4343545 (-) | False | LOC113523868 |
| XM_034312956.1 | mRNA | downstream | 13994 | 4331260 ~ 4343545 (-) | True | LOC113523868 |
| XM_026909970.2 | mRNA | downstream | 297025 | 4044706 ~ 4060514 (-) | True | cd36 |
| XM_034313185.1 | mRNA | downstream | 412238 | 3919302 ~ 3945301 (-) | True | kdm7aa |
| XM_034313181.1 | mRNA | downstream | 450886 | 3857515 ~ 3906653 (-) | True | kmt2e |
| XM_026912198.2 | mRNA | upstream | 327007 | 4784128 ~ 4792797 (-) | True | psmc2 |
| XM_026922701.2 | mRNA | upstream | 440149 | 4897270 ~ 4917780 (-) | True | gys2 |
| XM_026922781.2 | mRNA | upstream | 468595 | 4925716 ~ 4938813 (-) | True | ldhba |
| XM_034313267.1 | mRNA | upstream | 497170 | 4954291 ~ 4965093 (-) | False | slc25a3a |
| XM_034313265.1 | mRNA | upstream | 497170 | 4954291 ~ 4965093 (-) | True | slc25a3a |
| TU327840 | other | downstream | 57015 | 4297860 ~ 4300524 (-) | True | G276530 |
| TU327682 | other | downstream | 265676 | 4082278 ~ 4091863 (-) | True | G276421 |
| TU327549 | other | downstream | 620462 | 3736130 ~ 3737077 (-) | True | G276340 |
| XR_004580002.1 | other | downstream | 785613 | 3565035 ~ 3571926 (-) | True | LOC117599595 |
| TU327175 | other | downstream | 818796 | 3536997 ~ 3538743 (-) | True | G276075 |
| LOC117599578 | other | upstream | 8940 | 4466061 ~ 4467626 (-) | True | LOC117599578 |
| LOC117599583 | other | upstream | 20566 | 4477687 ~ 4478367 (-) | True | LOC117599583 |
| TU327795 | other | upstream | 20646 | 4477767 ~ 4587096 (-) | False | G276503 |
| LOC117599584 | other | upstream | 37844 | 4494965 ~ 4495572 (-) | True | LOC117599584 |
| LOC117599585 | other | upstream | 43276 | 4500397 ~ 4501320 (-) | True | LOC117599585 |
