Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117599560 |
| length | 402 |
| RNA type | V_segment |
| GC content | 0.48 |
| exon number | 2 |
| gene id | LOC117599560 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 4424194 ~ 4424693 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU327870 | lncRNA | downstream | 9078 | 4400123 ~ 4415116 (-) | True | G276556 |
| TU327859 | lncRNA | downstream | 89650 | 4333555 ~ 4334544 (-) | False | LOC113523868 |
| TU327824 | lncRNA | downstream | 101513 | 4278059 ~ 4322681 (-) | False | G276515 |
| TU327822 | lncRNA | downstream | 101513 | 4320491 ~ 4322681 (-) | True | G276515 |
| TU327849 | lncRNA | downstream | 115157 | 4308588 ~ 4309037 (-) | True | G276538 |
| TU327796 | lncRNA | upstream | 4805 | 4429498 ~ 4482994 (-) | False | G276503 |
| TU327891 | lncRNA | upstream | 25189 | 4449882 ~ 4502862 (-) | True | G276570 |
| TU327896 | lncRNA | upstream | 41580 | 4466273 ~ 4482565 (-) | False | LOC117599578 |
| TU328119 | lncRNA | upstream | 373966 | 4798659 ~ 4799157 (-) | True | G276749 |
| TU328127 | lncRNA | upstream | 377214 | 4801907 ~ 4844371 (-) | True | G276755 |
| XM_026909919.2 | mRNA | downstream | 80649 | 4331260 ~ 4343545 (-) | False | LOC113523868 |
| XM_034312956.1 | mRNA | downstream | 80649 | 4331260 ~ 4343545 (-) | True | LOC113523868 |
| XM_026909970.2 | mRNA | downstream | 363680 | 4044706 ~ 4060514 (-) | True | cd36 |
| XM_034313185.1 | mRNA | downstream | 478893 | 3919302 ~ 3945301 (-) | True | kdm7aa |
| XM_034313181.1 | mRNA | downstream | 517541 | 3857515 ~ 3906653 (-) | True | kmt2e |
| XM_026912198.2 | mRNA | upstream | 359435 | 4784128 ~ 4792797 (-) | True | psmc2 |
| XM_026922701.2 | mRNA | upstream | 472577 | 4897270 ~ 4917780 (-) | True | gys2 |
| XM_026922781.2 | mRNA | upstream | 501023 | 4925716 ~ 4938813 (-) | True | ldhba |
| XM_034313267.1 | mRNA | upstream | 529598 | 4954291 ~ 4965093 (-) | False | slc25a3a |
| XM_034313265.1 | mRNA | upstream | 529598 | 4954291 ~ 4965093 (-) | True | slc25a3a |
| LOC117599559 | other | downstream | 20079 | 4403511 ~ 4404115 (-) | True | LOC117599559 |
| LOC117599550 | other | downstream | 24259 | 4399281 ~ 4399935 (-) | True | LOC117599550 |
| LOC117599554 | other | downstream | 37090 | 4386342 ~ 4387104 (-) | True | LOC117599554 |
| LOC117599551 | other | downstream | 62252 | 4361332 ~ 4361942 (-) | True | LOC117599551 |
| TU327840 | other | downstream | 123670 | 4297860 ~ 4300524 (-) | True | G276530 |
| LOC117599558 | other | upstream | 4361 | 4429054 ~ 4429953 (-) | True | LOC117599558 |
| LOC117599553 | other | upstream | 14543 | 4439236 ~ 4439760 (-) | True | LOC117599553 |
| LOC117599556 | other | upstream | 24328 | 4449021 ~ 4449660 (-) | True | LOC117599556 |
| LOC117599557 | other | upstream | 31614 | 4456307 ~ 4457044 (-) | True | LOC117599557 |
| LOC117599578 | other | upstream | 41368 | 4466061 ~ 4467626 (-) | True | LOC117599578 |
