Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU326100 |
| length | 399 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G275167 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 703331 ~ 704306 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU326060 | lncRNA | downstream | 23666 | 382925 ~ 679665 (-) | True | G275134 |
| XR_004579934.1 | lncRNA | downstream | 169713 | 532826 ~ 533618 (-) | True | LOC117599521 |
| XR_004579905.1 | lncRNA | downstream | 172591 | 530099 ~ 530740 (-) | True | LOC117599492 |
| TU326075 | lncRNA | downstream | 185289 | 514984 ~ 518042 (-) | False | LOC113532194 |
| TU326076 | lncRNA | downstream | 185289 | 514984 ~ 518042 (-) | False | LOC113532194 |
| TU326104 | lncRNA | upstream | 4331 | 708331 ~ 718266 (-) | True | G275169 |
| TU326105 | lncRNA | upstream | 14445 | 718445 ~ 719883 (-) | True | G275170 |
| TU326113 | lncRNA | upstream | 42450 | 746450 ~ 750995 (-) | True | G275178 |
| TU326147 | lncRNA | upstream | 52400 | 756400 ~ 782210 (-) | True | G275202 |
| TU326148 | lncRNA | upstream | 54942 | 758942 ~ 784853 (-) | True | G275203 |
| XM_034313113.1 | mRNA | downstream | 8848 | 686036 ~ 694483 (-) | True | LOC113543469 |
| XM_034313112.1 | mRNA | downstream | 8848 | 686036 ~ 694483 (-) | False | LOC113543469 |
| XM_034313108.1 | mRNA | downstream | 20256 | 663725 ~ 683075 (-) | False | LOC117595727 |
| XM_034313110.1 | mRNA | downstream | 20256 | 663725 ~ 683075 (-) | False | LOC117595727 |
| XM_034313107.1 | mRNA | downstream | 20256 | 663725 ~ 683075 (-) | True | LOC117595727 |
| XM_034312963.1 | mRNA | upstream | 201247 | 905247 ~ 906730 (-) | True | LOC117599425 |
| XM_034312964.1 | mRNA | upstream | 203230 | 907230 ~ 907847 (-) | True | LOC117599426 |
| XM_034313122.1 | mRNA | upstream | 471310 | 1175310 ~ 1177234 (-) | True | LOC117599470 |
| XM_034312967.1 | mRNA | upstream | 538138 | 1242138 ~ 1255186 (-) | True | LOC117599427 |
| XM_034312968.1 | mRNA | upstream | 559749 | 1263749 ~ 1297899 (-) | True | LOC117599428 |
| XR_004579923.1 | other | downstream | 71944 | 629064 ~ 631387 (-) | True | LOC117599510 |
| TU326089 | other | downstream | 91380 | 609003 ~ 611951 (-) | False | LOC117599466 |
| XR_004579946.1 | other | downstream | 102302 | 597414 ~ 601029 (-) | True | LOC117599533 |
| XR_004579942.1 | other | downstream | 116513 | 583198 ~ 586818 (-) | True | LOC117599529 |
| TU326084 | other | downstream | 164033 | 536446 ~ 539298 (-) | True | G275152 |
| XR_004579897.1 | other | upstream | 165990 | 869990 ~ 870475 (-) | True | LOC117599484 |
| XR_004579907.1 | other | upstream | 428088 | 1132088 ~ 1132569 (-) | True | LOC117599494 |
| XR_004579908.1 | other | upstream | 578454 | 1282454 ~ 1282934 (-) | True | LOC117599495 |
| TU326402 | other | upstream | 590140 | 1294140 ~ 1295377 (-) | False | LOC117599428 |
| XR_004579909.1 | other | upstream | 684196 | 1388196 ~ 1388678 (-) | True | LOC117599496 |
