Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU326148 |
| length | 324 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 2 |
| gene id | G275203 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 758942 ~ 784853 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU326113 | lncRNA | downstream | 7947 | 746450 ~ 750995 (-) | True | G275178 |
| TU326105 | lncRNA | downstream | 39059 | 718445 ~ 719883 (-) | True | G275170 |
| TU326104 | lncRNA | downstream | 40676 | 708331 ~ 718266 (-) | True | G275169 |
| TU326103 | lncRNA | downstream | 53842 | 703770 ~ 705100 (-) | True | G275168 |
| TU326102 | lncRNA | downstream | 54636 | 703331 ~ 704306 (-) | False | G275167 |
| XR_004579906.1 | lncRNA | upstream | 55775 | 840628 ~ 841268 (-) | True | LOC117599493 |
| XR_004579925.1 | lncRNA | upstream | 61080 | 845933 ~ 846981 (-) | True | LOC117599512 |
| XR_004579904.1 | lncRNA | upstream | 92185 | 877038 ~ 878254 (-) | True | LOC117599491 |
| XR_004579889.1 | lncRNA | upstream | 115920 | 900773 ~ 901840 (-) | True | LOC117599477 |
| XR_004579890.1 | lncRNA | upstream | 115923 | 900776 ~ 901840 (-) | False | LOC117599477 |
| XM_034313113.1 | mRNA | downstream | 64459 | 686036 ~ 694483 (-) | True | LOC113543469 |
| XM_034313112.1 | mRNA | downstream | 64459 | 686036 ~ 694483 (-) | False | LOC113543469 |
| XM_034313108.1 | mRNA | downstream | 75867 | 663725 ~ 683075 (-) | False | LOC117595727 |
| XM_034312963.1 | mRNA | upstream | 120394 | 905247 ~ 906730 (-) | True | LOC117599425 |
| XM_034312964.1 | mRNA | upstream | 122377 | 907230 ~ 907847 (-) | True | LOC117599426 |
| XM_034313122.1 | mRNA | upstream | 390457 | 1175310 ~ 1177234 (-) | True | LOC117599470 |
| XM_034312967.1 | mRNA | upstream | 457285 | 1242138 ~ 1255186 (-) | True | LOC117599427 |
| XM_034312968.1 | mRNA | upstream | 478896 | 1263749 ~ 1297899 (-) | True | LOC117599428 |
| XR_004579923.1 | other | downstream | 127555 | 629064 ~ 631387 (-) | True | LOC117599510 |
| TU326089 | other | downstream | 146991 | 609003 ~ 611951 (-) | False | LOC117599466 |
| XR_004579946.1 | other | downstream | 157913 | 597414 ~ 601029 (-) | True | LOC117599533 |
| XR_004579942.1 | other | downstream | 172124 | 583198 ~ 586818 (-) | True | LOC117599529 |
| TU326084 | other | downstream | 219644 | 536446 ~ 539298 (-) | True | G275152 |
| XR_004579897.1 | other | upstream | 85137 | 869990 ~ 870475 (-) | True | LOC117599484 |
| XR_004579907.1 | other | upstream | 347235 | 1132088 ~ 1132569 (-) | True | LOC117599494 |
| XR_004579908.1 | other | upstream | 497601 | 1282454 ~ 1282934 (-) | True | LOC117599495 |
| TU326402 | other | upstream | 509287 | 1294140 ~ 1295377 (-) | False | LOC117599428 |
| XR_004579909.1 | other | upstream | 603343 | 1388196 ~ 1388678 (-) | True | LOC117599496 |
