Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034312968.1 |
| length | 909 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 5 |
| gene id | LOC117599428 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 1263749 ~ 1297899 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579887.1 | lncRNA | downstream | 1039 | 1261642 ~ 1262710 (-) | True | LOC117599476 |
| XR_004579888.1 | lncRNA | downstream | 1039 | 1261646 ~ 1262710 (-) | False | LOC117599476 |
| XR_004579945.1 | lncRNA | downstream | 21845 | 1241367 ~ 1241904 (-) | True | LOC117599532 |
| TU326392 | lncRNA | downstream | 114985 | 1145605 ~ 1148764 (-) | True | G275393 |
| XR_004579889.1 | lncRNA | downstream | 361909 | 900773 ~ 901840 (-) | True | LOC117599477 |
| TU326407 | lncRNA | upstream | 88653 | 1386552 ~ 1410588 (-) | True | G275408 |
| TU326366 | lncRNA | upstream | 98540 | 1396439 ~ 1462056 (-) | True | G275369 |
| TU326409 | lncRNA | upstream | 111792 | 1409691 ~ 1433883 (-) | False | G275408 |
| TU326415 | lncRNA | upstream | 115493 | 1413392 ~ 1454206 (-) | True | G275412 |
| TU326417 | lncRNA | upstream | 118471 | 1416370 ~ 1441145 (-) | False | LOC117599432 |
| XM_034312967.1 | mRNA | downstream | 8563 | 1242138 ~ 1255186 (-) | True | LOC117599427 |
| XM_034313122.1 | mRNA | downstream | 86515 | 1175310 ~ 1177234 (-) | True | LOC117599470 |
| XM_034312964.1 | mRNA | downstream | 355902 | 907230 ~ 907847 (-) | True | LOC117599426 |
| XM_034312963.1 | mRNA | downstream | 357019 | 905247 ~ 906730 (-) | True | LOC117599425 |
| XM_034313113.1 | mRNA | downstream | 569266 | 686036 ~ 694483 (-) | True | LOC113543469 |
| XM_034312970.1 | mRNA | upstream | 68212 | 1366111 ~ 1376319 (-) | True | LOC117599430 |
| XM_034312971.1 | mRNA | upstream | 94001 | 1391900 ~ 1395944 (-) | True | LOC117599431 |
| XM_034312972.1 | mRNA | upstream | 118006 | 1415905 ~ 1425651 (-) | True | LOC117599432 |
| XM_034312975.1 | mRNA | upstream | 1073725 | 2371624 ~ 2373304 (-) | True | LOC117599435 |
| XM_034312976.1 | mRNA | upstream | 1114643 | 2412542 ~ 2415193 (-) | True | LOC117599436 |
| XR_004579907.1 | other | downstream | 131180 | 1132088 ~ 1132569 (-) | True | LOC117599494 |
| XR_004579897.1 | other | downstream | 393274 | 869990 ~ 870475 (-) | True | LOC117599484 |
| XR_004579923.1 | other | downstream | 632362 | 629064 ~ 631387 (-) | True | LOC117599510 |
| TU326089 | other | downstream | 651798 | 609003 ~ 611951 (-) | False | LOC117599466 |
| XR_004579946.1 | other | downstream | 662720 | 597414 ~ 601029 (-) | True | LOC117599533 |
| XR_004579909.1 | other | upstream | 90297 | 1388196 ~ 1388678 (-) | True | LOC117599496 |
| XR_004579902.1 | other | upstream | 113232 | 1411131 ~ 1411615 (-) | True | LOC117599489 |
| TU326424 | other | upstream | 167960 | 1465859 ~ 1577516 (-) | True | G275420 |
| XR_004580038.1 | other | upstream | 198163 | 1496062 ~ 1496168 (-) | True | LOC117599633 |
| XR_004579898.1 | other | upstream | 291414 | 1589313 ~ 1589798 (-) | True | LOC117599485 |
