Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU326407 |
| length | 707 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 3 |
| gene id | G275408 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 1386552 ~ 1433883 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU326381 | lncRNA | downstream | 73017 | 1097145 ~ 1313535 (-) | True | G275382 |
| XR_004579911.1 | lncRNA | downstream | 92576 | 1292165 ~ 1293976 (-) | True | LOC117599498 |
| XR_004579887.1 | lncRNA | downstream | 123842 | 1261642 ~ 1262710 (-) | True | LOC117599476 |
| XR_004579888.1 | lncRNA | downstream | 123842 | 1261646 ~ 1262710 (-) | False | LOC117599476 |
| XR_004579945.1 | lncRNA | downstream | 144648 | 1241367 ~ 1241904 (-) | True | LOC117599532 |
| TU326415 | lncRNA | upstream | 2804 | 1413392 ~ 1454206 (-) | True | G275412 |
| TU326417 | lncRNA | upstream | 5782 | 1416370 ~ 1441145 (-) | False | LOC117599432 |
| TU326420 | lncRNA | upstream | 30651 | 1441239 ~ 1458199 (-) | True | G275416 |
| TU326421 | lncRNA | upstream | 38494 | 1449082 ~ 1451564 (-) | False | LOC117599503 |
| XR_004579916.1 | lncRNA | upstream | 38942 | 1449530 ~ 1451712 (-) | True | LOC117599503 |
| XM_034312970.1 | mRNA | downstream | 10233 | 1366111 ~ 1376319 (-) | True | LOC117599430 |
| XM_034312968.1 | mRNA | downstream | 88653 | 1263749 ~ 1297899 (-) | True | LOC117599428 |
| XM_034312967.1 | mRNA | downstream | 131366 | 1242138 ~ 1255186 (-) | True | LOC117599427 |
| XM_034313122.1 | mRNA | downstream | 209318 | 1175310 ~ 1177234 (-) | True | LOC117599470 |
| XM_034312964.1 | mRNA | downstream | 478705 | 907230 ~ 907847 (-) | True | LOC117599426 |
| XM_034312972.1 | mRNA | upstream | 5317 | 1415905 ~ 1425651 (-) | True | LOC117599432 |
| XM_034312975.1 | mRNA | upstream | 961036 | 2371624 ~ 2373304 (-) | True | LOC117599435 |
| XM_034312976.1 | mRNA | upstream | 1001954 | 2412542 ~ 2415193 (-) | True | LOC117599436 |
| XM_034313123.1 | mRNA | upstream | 1071795 | 2482383 ~ 2548694 (-) | True | LOC117599471 |
| XM_034312978.1 | mRNA | upstream | 1218077 | 2628665 ~ 2630328 (-) | True | LOC117599438 |
| TU326402 | other | downstream | 91175 | 1294140 ~ 1295377 (-) | False | LOC117599428 |
| XR_004579908.1 | other | downstream | 103618 | 1282454 ~ 1282934 (-) | True | LOC117599495 |
| XR_004579907.1 | other | downstream | 253983 | 1132088 ~ 1132569 (-) | True | LOC117599494 |
| XR_004579897.1 | other | downstream | 516077 | 869990 ~ 870475 (-) | True | LOC117599484 |
| XR_004579923.1 | other | downstream | 755165 | 629064 ~ 631387 (-) | True | LOC117599510 |
| XR_004579902.1 | other | upstream | 543 | 1411131 ~ 1411615 (-) | True | LOC117599489 |
| TU326424 | other | upstream | 55271 | 1465859 ~ 1577516 (-) | True | G275420 |
| XR_004580038.1 | other | upstream | 85474 | 1496062 ~ 1496168 (-) | True | LOC117599633 |
| XR_004579898.1 | other | upstream | 178725 | 1589313 ~ 1589798 (-) | True | LOC117599485 |
| XR_004579899.1 | other | upstream | 216191 | 1626779 ~ 1627263 (-) | False | LOC117599486 |
