Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579899.1 |
| length | 172 |
| RNA type | ncRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC117599486 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 1587770 ~ 1627263 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579938.1 | lncRNA | downstream | 32815 | 1593154 ~ 1593964 (-) | True | LOC117599525 |
| TU326423 | lncRNA | downstream | 53457 | 1459923 ~ 1573322 (-) | True | G275419 |
| TU326420 | lncRNA | downstream | 168580 | 1441239 ~ 1458199 (-) | True | G275416 |
| XR_004579916.1 | lncRNA | downstream | 175067 | 1449530 ~ 1451712 (-) | True | LOC117599503 |
| TU326421 | lncRNA | downstream | 175215 | 1449082 ~ 1451564 (-) | False | LOC117599503 |
| XR_004579937.1 | lncRNA | upstream | 1760 | 1629023 ~ 1629581 (-) | True | LOC117599524 |
| XR_004579936.1 | lncRNA | upstream | 4476 | 1631739 ~ 1632322 (-) | True | LOC117599523 |
| XR_004579912.1 | lncRNA | upstream | 64044 | 1691307 ~ 1692174 (-) | True | LOC117599499 |
| XR_004579913.1 | lncRNA | upstream | 87629 | 1714892 ~ 1715739 (-) | True | LOC117599500 |
| XR_004579891.1 | lncRNA | upstream | 199553 | 1826816 ~ 1832783 (-) | True | LOC117599478 |
| XM_034312972.1 | mRNA | downstream | 201128 | 1415905 ~ 1425651 (-) | True | LOC117599432 |
| XM_034312971.1 | mRNA | downstream | 230835 | 1391900 ~ 1395944 (-) | True | LOC117599431 |
| XM_034312970.1 | mRNA | downstream | 250460 | 1366111 ~ 1376319 (-) | True | LOC117599430 |
| XM_034312968.1 | mRNA | downstream | 328880 | 1263749 ~ 1297899 (-) | True | LOC117599428 |
| XM_034312967.1 | mRNA | downstream | 371593 | 1242138 ~ 1255186 (-) | True | LOC117599427 |
| XM_034312975.1 | mRNA | upstream | 744361 | 2371624 ~ 2373304 (-) | True | LOC117599435 |
| XM_034312976.1 | mRNA | upstream | 785279 | 2412542 ~ 2415193 (-) | True | LOC117599436 |
| XM_034313123.1 | mRNA | upstream | 855120 | 2482383 ~ 2548694 (-) | True | LOC117599471 |
| XM_034312978.1 | mRNA | upstream | 1001402 | 2628665 ~ 2630328 (-) | True | LOC117599438 |
| XM_034312980.1 | mRNA | upstream | 1037134 | 2664397 ~ 2667515 (-) | True | LOC117599439 |
| XR_004579898.1 | other | downstream | 36981 | 1589313 ~ 1589798 (-) | True | LOC117599485 |
| TU326424 | other | downstream | 49263 | 1465859 ~ 1577516 (-) | True | G275420 |
| XR_004580038.1 | other | downstream | 130611 | 1496062 ~ 1496168 (-) | True | LOC117599633 |
| XR_004579902.1 | other | downstream | 215164 | 1411131 ~ 1411615 (-) | True | LOC117599489 |
| XR_004579909.1 | other | downstream | 238101 | 1388196 ~ 1388678 (-) | True | LOC117599496 |
| XR_004579917.1 | other | upstream | 59945 | 1687208 ~ 1687679 (-) | True | LOC117599504 |
| XR_004579919.1 | other | upstream | 299070 | 1926333 ~ 1927161 (-) | True | LOC117599506 |
| XR_004580035.1 | other | upstream | 389796 | 2017059 ~ 2017165 (-) | True | LOC117599628 |
| TU326484 | other | upstream | 410972 | 2038235 ~ 2040062 (-) | True | G275475 |
| XR_004579900.1 | other | upstream | 426435 | 2053698 ~ 2054182 (-) | True | LOC117599487 |
