Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU326484 |
| length | 691 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 4 |
| gene id | G275475 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 2038235 ~ 2040062 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579930.1 | lncRNA | downstream | 106061 | 1930930 ~ 1932174 (-) | True | LOC117599517 |
| TU326465 | lncRNA | downstream | 131821 | 1861497 ~ 1906414 (-) | True | G275457 |
| XR_004579933.1 | lncRNA | downstream | 204380 | 1833446 ~ 1833855 (-) | True | LOC117599520 |
| XR_004579891.1 | lncRNA | downstream | 205452 | 1826816 ~ 1832783 (-) | True | LOC117599478 |
| XR_004579913.1 | lncRNA | downstream | 322496 | 1714892 ~ 1715739 (-) | True | LOC117599500 |
| XR_004579932.1 | lncRNA | upstream | 18666 | 2058728 ~ 2059930 (-) | True | LOC117599519 |
| TU326492 | lncRNA | upstream | 25612 | 2065674 ~ 2069129 (-) | False | G275481 |
| XR_004579941.1 | lncRNA | upstream | 66335 | 2106397 ~ 2107206 (-) | True | LOC117599528 |
| TU326501 | lncRNA | upstream | 75147 | 2115209 ~ 2116471 (-) | True | G275488 |
| TU326513 | lncRNA | upstream | 191376 | 2231438 ~ 2232746 (-) | True | G275500 |
| XM_034312972.1 | mRNA | downstream | 612584 | 1415905 ~ 1425651 (-) | True | LOC117599432 |
| XM_034312971.1 | mRNA | downstream | 642291 | 1391900 ~ 1395944 (-) | True | LOC117599431 |
| XM_034312970.1 | mRNA | downstream | 661916 | 1366111 ~ 1376319 (-) | True | LOC117599430 |
| XM_034312968.1 | mRNA | downstream | 740336 | 1263749 ~ 1297899 (-) | True | LOC117599428 |
| XM_034312967.1 | mRNA | downstream | 783049 | 1242138 ~ 1255186 (-) | True | LOC117599427 |
| XM_034312975.1 | mRNA | upstream | 331562 | 2371624 ~ 2373304 (-) | True | LOC117599435 |
| XM_034312976.1 | mRNA | upstream | 372480 | 2412542 ~ 2415193 (-) | True | LOC117599436 |
| XM_034313123.1 | mRNA | upstream | 442321 | 2482383 ~ 2548694 (-) | True | LOC117599471 |
| XM_034312978.1 | mRNA | upstream | 588603 | 2628665 ~ 2630328 (-) | True | LOC117599438 |
| XM_034312980.1 | mRNA | upstream | 624335 | 2664397 ~ 2667515 (-) | True | LOC117599439 |
| XR_004580035.1 | other | downstream | 21070 | 2017059 ~ 2017165 (-) | True | LOC117599628 |
| XR_004579919.1 | other | downstream | 111074 | 1926333 ~ 1927161 (-) | True | LOC117599506 |
| XR_004579917.1 | other | downstream | 350556 | 1687208 ~ 1687679 (-) | True | LOC117599504 |
| XR_004579899.1 | other | downstream | 410972 | 1626779 ~ 1627263 (-) | False | LOC117599486 |
| XR_004579898.1 | other | downstream | 448437 | 1589313 ~ 1589798 (-) | True | LOC117599485 |
| XR_004579900.1 | other | upstream | 13636 | 2053698 ~ 2054182 (-) | True | LOC117599487 |
| TU326491 | other | upstream | 21425 | 2061487 ~ 2062120 (-) | True | G275480 |
| TU326493 | other | upstream | 27595 | 2067657 ~ 2069129 (-) | True | G275481 |
| XR_004579920.1 | other | upstream | 39888 | 2079950 ~ 2080777 (-) | True | LOC117599507 |
| TU326496 | other | upstream | 49002 | 2089064 ~ 2111948 (-) | True | G275484 |
