Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU327114 |
| length | 686 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G276022 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 3218189 ~ 3219050 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU326970 | lncRNA | downstream | 236327 | 2979837 ~ 2981862 (-) | True | G275891 |
| TU326881 | lncRNA | downstream | 372285 | 2834700 ~ 2845904 (-) | True | G275815 |
| TU326553 | lncRNA | downstream | 508810 | 2632426 ~ 2709379 (-) | True | G275536 |
| TU326541 | lncRNA | downstream | 648925 | 2535444 ~ 2569264 (-) | True | G275524 |
| TU326540 | lncRNA | downstream | 668537 | 2514744 ~ 2549652 (-) | True | G275523 |
| TU327064 | lncRNA | upstream | 7545 | 3226595 ~ 3282365 (-) | False | ppp1r12a |
| TU327068 | lncRNA | upstream | 7545 | 3226595 ~ 3282365 (-) | False | ppp1r12a |
| TU327065 | lncRNA | upstream | 38651 | 3257701 ~ 3282365 (-) | False | ppp1r12a |
| TU327066 | lncRNA | upstream | 38651 | 3257701 ~ 3282365 (-) | False | ppp1r12a |
| TU327067 | lncRNA | upstream | 38651 | 3257701 ~ 3282365 (-) | False | ppp1r12a |
| XM_034312982.1 | mRNA | downstream | 540157 | 2672021 ~ 2678032 (-) | True | LOC117599441 |
| XM_034312981.1 | mRNA | downstream | 548853 | 2668355 ~ 2669336 (-) | True | LOC117599440 |
| XM_034312980.1 | mRNA | downstream | 550674 | 2664397 ~ 2667515 (-) | True | LOC117599439 |
| XM_034312978.1 | mRNA | downstream | 587861 | 2628665 ~ 2630328 (-) | True | LOC117599438 |
| XM_034313123.1 | mRNA | downstream | 669495 | 2482383 ~ 2548694 (-) | True | LOC117599471 |
| XM_034312985.1 | mRNA | upstream | 39968 | 3259018 ~ 3335017 (-) | True | ppp1r12a |
| XM_034312986.1 | mRNA | upstream | 150630 | 3369680 ~ 3384923 (-) | True | rps16 |
| XM_034313336.1 | mRNA | upstream | 211140 | 3430190 ~ 3494016 (-) | False | lin7a |
| XM_034313337.1 | mRNA | upstream | 211140 | 3430190 ~ 3494013 (-) | False | lin7a |
| XM_034313387.1 | mRNA | upstream | 326026 | 3545076 ~ 3691686 (-) | True | ppfia2 |
| TU327069 | other | downstream | 16892 | 3142534 ~ 3201297 (-) | True | G275981 |
| XR_004579901.1 | other | downstream | 674558 | 2543147 ~ 2543631 (-) | True | LOC117599488 |
| XR_004579903.1 | other | downstream | 711095 | 2506587 ~ 2507094 (-) | True | LOC117599490 |
| XR_004579918.1 | other | downstream | 763108 | 2454252 ~ 2455081 (-) | True | LOC117599505 |
| XR_004579944.1 | other | downstream | 789248 | 2428508 ~ 2428941 (-) | True | LOC117599531 |
| TU327062 | other | upstream | 66787 | 3285837 ~ 3293790 (-) | False | ppp1r12a |
| XR_004579995.1 | other | upstream | 211140 | 3430190 ~ 3494016 (-) | True | lin7a |
| TU327175 | other | upstream | 317947 | 3536997 ~ 3538743 (-) | True | G276075 |
| XR_004580002.1 | other | upstream | 345985 | 3565035 ~ 3571926 (-) | True | LOC117599595 |
| TU327549 | other | upstream | 517080 | 3736130 ~ 3737077 (-) | True | G276340 |
