Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU327132 |
| length | 395 |
| lncRNA type | intronic |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G276038 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 3372624 ~ 3373018 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU327127 | lncRNA | downstream | 292 | 3299257 ~ 3372332 (-) | False | rps16 |
| TU327125 | lncRNA | downstream | 292 | 3363442 ~ 3372332 (-) | False | rps16 |
| XR_003402473.2 | lncRNA | downstream | 16191 | 3355454 ~ 3356433 (-) | True | LOC113523901 |
| TU327068 | lncRNA | downstream | 90259 | 3226595 ~ 3282365 (-) | False | ppp1r12a |
| TU327145 | lncRNA | upstream | 41850 | 3414868 ~ 3415140 (-) | True | G276049 |
| TU327261 | lncRNA | upstream | 266949 | 3639967 ~ 3640783 (-) | True | G276153 |
| TU327577 | lncRNA | upstream | 386193 | 3759211 ~ 3829402 (-) | False | golgb1 |
| TU327559 | lncRNA | upstream | 429375 | 3802393 ~ 3815365 (-) | True | G276342 |
| TU327583 | lncRNA | upstream | 439522 | 3812540 ~ 3813351 (-) | True | G276353 |
| XM_034312985.1 | mRNA | downstream | 37607 | 3259018 ~ 3335017 (-) | True | ppp1r12a |
| XM_034313335.1 | mRNA | downstream | 125628 | 3205288 ~ 3246996 (-) | True | pawr |
| XM_034312982.1 | mRNA | downstream | 694592 | 2672021 ~ 2678032 (-) | True | LOC117599441 |
| XM_034312981.1 | mRNA | downstream | 703288 | 2668355 ~ 2669336 (-) | True | LOC117599440 |
| XM_034312980.1 | mRNA | downstream | 705109 | 2664397 ~ 2667515 (-) | True | LOC117599439 |
| XM_034313336.1 | mRNA | upstream | 57172 | 3430190 ~ 3494016 (-) | False | lin7a |
| XM_034313337.1 | mRNA | upstream | 57172 | 3430190 ~ 3494013 (-) | False | lin7a |
| XM_034313387.1 | mRNA | upstream | 172058 | 3545076 ~ 3691686 (-) | True | ppfia2 |
| XM_026909954.2 | mRNA | upstream | 365866 | 3738884 ~ 3755857 (-) | False | hcls1 |
| XM_026909953.2 | mRNA | upstream | 365866 | 3738884 ~ 3755856 (-) | True | hcls1 |
| TU327062 | other | downstream | 78834 | 3285837 ~ 3293790 (-) | False | ppp1r12a |
| TU327069 | other | downstream | 171327 | 3142534 ~ 3201297 (-) | True | G275981 |
| XR_004579901.1 | other | downstream | 828993 | 2543147 ~ 2543631 (-) | True | LOC117599488 |
| XR_004579903.1 | other | downstream | 865530 | 2506587 ~ 2507094 (-) | True | LOC117599490 |
| XR_004579918.1 | other | downstream | 917543 | 2454252 ~ 2455081 (-) | True | LOC117599505 |
| XR_004579995.1 | other | upstream | 57172 | 3430190 ~ 3494016 (-) | True | lin7a |
| TU327175 | other | upstream | 163979 | 3536997 ~ 3538743 (-) | True | G276075 |
| XR_004580002.1 | other | upstream | 192017 | 3565035 ~ 3571926 (-) | True | LOC117599595 |
| TU327549 | other | upstream | 363112 | 3736130 ~ 3737077 (-) | True | G276340 |
| TU327682 | other | upstream | 709260 | 4082278 ~ 4091863 (-) | True | G276421 |
