Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU327145 |
| length | 273 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G276049 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 3414868 ~ 3415140 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU327132 | lncRNA | downstream | 41850 | 3372624 ~ 3373018 (-) | True | G276038 |
| TU327127 | lncRNA | downstream | 42536 | 3299257 ~ 3372332 (-) | False | rps16 |
| TU327125 | lncRNA | downstream | 42536 | 3363442 ~ 3372332 (-) | False | rps16 |
| XR_003402473.2 | lncRNA | downstream | 58435 | 3355454 ~ 3356433 (-) | True | LOC113523901 |
| TU327066 | lncRNA | downstream | 132503 | 3257701 ~ 3282365 (-) | False | ppp1r12a |
| TU327261 | lncRNA | upstream | 224827 | 3639967 ~ 3640783 (-) | True | G276153 |
| TU327577 | lncRNA | upstream | 344071 | 3759211 ~ 3829402 (-) | False | golgb1 |
| TU327559 | lncRNA | upstream | 387253 | 3802393 ~ 3815365 (-) | True | G276342 |
| TU327583 | lncRNA | upstream | 397400 | 3812540 ~ 3813351 (-) | True | G276353 |
| TU327616 | lncRNA | upstream | 486122 | 3901262 ~ 3904931 (-) | False | G276384 |
| XM_034312986.1 | mRNA | downstream | 29945 | 3369680 ~ 3384923 (-) | True | rps16 |
| XM_034312985.1 | mRNA | downstream | 79851 | 3259018 ~ 3335017 (-) | True | ppp1r12a |
| XM_034313335.1 | mRNA | downstream | 167872 | 3205288 ~ 3246996 (-) | True | pawr |
| XM_034312982.1 | mRNA | downstream | 736836 | 2672021 ~ 2678032 (-) | True | LOC117599441 |
| XM_034312981.1 | mRNA | downstream | 745532 | 2668355 ~ 2669336 (-) | True | LOC117599440 |
| XM_034313336.1 | mRNA | upstream | 15050 | 3430190 ~ 3494016 (-) | False | lin7a |
| XM_034313337.1 | mRNA | upstream | 15050 | 3430190 ~ 3494013 (-) | False | lin7a |
| XM_034313387.1 | mRNA | upstream | 129936 | 3545076 ~ 3691686 (-) | True | ppfia2 |
| XM_026909954.2 | mRNA | upstream | 323744 | 3738884 ~ 3755857 (-) | False | hcls1 |
| XM_026909953.2 | mRNA | upstream | 323744 | 3738884 ~ 3755856 (-) | True | hcls1 |
| TU327062 | other | downstream | 121078 | 3285837 ~ 3293790 (-) | False | ppp1r12a |
| TU327069 | other | downstream | 213571 | 3142534 ~ 3201297 (-) | True | G275981 |
| XR_004579901.1 | other | downstream | 871237 | 2543147 ~ 2543631 (-) | True | LOC117599488 |
| XR_004579903.1 | other | downstream | 907774 | 2506587 ~ 2507094 (-) | True | LOC117599490 |
| XR_004579918.1 | other | downstream | 959787 | 2454252 ~ 2455081 (-) | True | LOC117599505 |
| XR_004579995.1 | other | upstream | 15050 | 3430190 ~ 3494016 (-) | True | lin7a |
| TU327175 | other | upstream | 121857 | 3536997 ~ 3538743 (-) | True | G276075 |
| XR_004580002.1 | other | upstream | 149895 | 3565035 ~ 3571926 (-) | True | LOC117599595 |
| TU327549 | other | upstream | 320990 | 3736130 ~ 3737077 (-) | True | G276340 |
| TU327682 | other | upstream | 667138 | 4082278 ~ 4091863 (-) | True | G276421 |
