Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU327559 |
| length | 514 |
| lncRNA type | sense_over |
| GC content | 0.57 |
| exon number | 2 |
| gene id | G276342 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 3802393 ~ 3815365 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU327261 | lncRNA | downstream | 161610 | 3639967 ~ 3640783 (-) | True | G276153 |
| TU327145 | lncRNA | downstream | 387253 | 3414868 ~ 3415140 (-) | True | G276049 |
| TU327132 | lncRNA | downstream | 429375 | 3372624 ~ 3373018 (-) | True | G276038 |
| TU327125 | lncRNA | downstream | 430061 | 3363442 ~ 3372332 (-) | False | rps16 |
| XR_003402473.2 | lncRNA | downstream | 445960 | 3355454 ~ 3356433 (-) | True | LOC113523901 |
| TU327616 | lncRNA | upstream | 85897 | 3901262 ~ 3904931 (-) | False | G276384 |
| TU327618 | lncRNA | upstream | 85897 | 3901262 ~ 3902898 (-) | True | G276384 |
| TU327625 | lncRNA | upstream | 98174 | 3913539 ~ 3913989 (-) | True | G276387 |
| TU327626 | lncRNA | upstream | 98174 | 3913539 ~ 3913989 (-) | False | G276387 |
| TU327627 | lncRNA | upstream | 99963 | 3915328 ~ 3916117 (-) | True | G276388 |
| XM_034313225.1 | mRNA | downstream | 19610 | 3760116 ~ 3782783 (-) | True | golgb1 |
| XM_026909954.2 | mRNA | downstream | 46536 | 3738884 ~ 3755857 (-) | False | hcls1 |
| XM_026909953.2 | mRNA | downstream | 46537 | 3738884 ~ 3755856 (-) | True | hcls1 |
| XM_034313387.1 | mRNA | downstream | 110707 | 3545076 ~ 3691686 (-) | True | ppfia2 |
| XM_034313336.1 | mRNA | downstream | 308377 | 3430190 ~ 3494016 (-) | False | lin7a |
| XM_034313181.1 | mRNA | upstream | 42150 | 3857515 ~ 3906653 (-) | True | kmt2e |
| XM_034313185.1 | mRNA | upstream | 103937 | 3919302 ~ 3945301 (-) | True | kdm7aa |
| XM_026909970.2 | mRNA | upstream | 229341 | 4044706 ~ 4060514 (-) | True | cd36 |
| XM_026909919.2 | mRNA | upstream | 515895 | 4331260 ~ 4343545 (-) | False | LOC113523868 |
| XM_034312956.1 | mRNA | upstream | 515895 | 4331260 ~ 4343545 (-) | True | LOC113523868 |
| TU327549 | other | downstream | 65316 | 3736130 ~ 3737077 (-) | True | G276340 |
| XR_004580002.1 | other | downstream | 230467 | 3565035 ~ 3571926 (-) | True | LOC117599595 |
| TU327175 | other | downstream | 263650 | 3536997 ~ 3538743 (-) | True | G276075 |
| XR_004579995.1 | other | downstream | 308377 | 3430190 ~ 3494016 (-) | True | lin7a |
| TU327062 | other | downstream | 508603 | 3285837 ~ 3293790 (-) | False | ppp1r12a |
| TU327682 | other | upstream | 266913 | 4082278 ~ 4091863 (-) | True | G276421 |
| TU327840 | other | upstream | 482495 | 4297860 ~ 4300524 (-) | True | G276530 |
| LOC117599555 | other | upstream | 542174 | 4357539 ~ 4457121 (-) | True | LOC117599555 |
| LOC117599551 | other | upstream | 545967 | 4361332 ~ 4361942 (-) | True | LOC117599551 |
| LOC117599554 | other | upstream | 570977 | 4386342 ~ 4387104 (-) | True | LOC117599554 |
