Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU327796 |
| length | 306 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G276503 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 4358625 ~ 4587096 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU327783 | lncRNA | downstream | 4956 | 4358625 ~ 4424542 (-) | True | G276503 |
| TU327870 | lncRNA | downstream | 14382 | 4400123 ~ 4415116 (-) | True | G276556 |
| TU327859 | lncRNA | downstream | 94954 | 4333555 ~ 4334544 (-) | False | LOC113523868 |
| TU327824 | lncRNA | downstream | 106817 | 4278059 ~ 4322681 (-) | False | G276515 |
| TU327822 | lncRNA | downstream | 106817 | 4320491 ~ 4322681 (-) | True | G276515 |
| TU328119 | lncRNA | upstream | 315665 | 4798659 ~ 4799157 (-) | True | G276749 |
| TU328127 | lncRNA | upstream | 318913 | 4801907 ~ 4844371 (-) | True | G276755 |
| TU328136 | lncRNA | upstream | 334114 | 4817108 ~ 4841754 (-) | False | G276761 |
| TU328138 | lncRNA | upstream | 334114 | 4817108 ~ 4876792 (-) | False | G276761 |
| TU328142 | lncRNA | upstream | 334114 | 4817108 ~ 4862107 (-) | True | G276761 |
| XM_026909919.2 | mRNA | downstream | 85953 | 4331260 ~ 4343545 (-) | False | LOC113523868 |
| XM_034312956.1 | mRNA | downstream | 85953 | 4331260 ~ 4343545 (-) | True | LOC113523868 |
| XM_026909970.2 | mRNA | downstream | 368984 | 4044706 ~ 4060514 (-) | True | cd36 |
| XM_034313185.1 | mRNA | downstream | 484197 | 3919302 ~ 3945301 (-) | True | kdm7aa |
| XM_034313181.1 | mRNA | downstream | 522845 | 3857515 ~ 3906653 (-) | True | kmt2e |
| XM_026912198.2 | mRNA | upstream | 301134 | 4784128 ~ 4792797 (-) | True | psmc2 |
| XM_026922701.2 | mRNA | upstream | 414276 | 4897270 ~ 4917780 (-) | True | gys2 |
| XM_026922781.2 | mRNA | upstream | 442722 | 4925716 ~ 4938813 (-) | True | ldhba |
| XM_034313267.1 | mRNA | upstream | 471297 | 4954291 ~ 4965093 (-) | False | slc25a3a |
| XM_034313265.1 | mRNA | upstream | 471297 | 4954291 ~ 4965093 (-) | True | slc25a3a |
| LOC117599560 | other | downstream | 4805 | 4424194 ~ 4424693 (-) | True | LOC117599560 |
| LOC117599559 | other | downstream | 25383 | 4403511 ~ 4404115 (-) | True | LOC117599559 |
| LOC117599550 | other | downstream | 29563 | 4399281 ~ 4399935 (-) | True | LOC117599550 |
| LOC117599554 | other | downstream | 42394 | 4386342 ~ 4387104 (-) | True | LOC117599554 |
| LOC117599551 | other | downstream | 67556 | 4361332 ~ 4361942 (-) | True | LOC117599551 |
| LOC117599584 | other | upstream | 11971 | 4494965 ~ 4495572 (-) | True | LOC117599584 |
| LOC117599585 | other | upstream | 17403 | 4500397 ~ 4501320 (-) | True | LOC117599585 |
| TU327794 | other | upstream | 17855 | 4500849 ~ 4587096 (-) | False | G276503 |
| LOC117599577 | other | upstream | 24445 | 4507439 ~ 4508169 (-) | True | LOC117599577 |
| LOC113525246 | other | upstream | 30937 | 4513931 ~ 4514617 (-) | True | LOC113525246 |
