Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU328123 |
| length | 591 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G276753 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 4880418 ~ 4881008 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU328138 | lncRNA | downstream | 3626 | 4817108 ~ 4876792 (-) | False | G276761 |
| TU328142 | lncRNA | downstream | 18311 | 4817108 ~ 4862107 (-) | True | G276761 |
| TU328127 | lncRNA | downstream | 36047 | 4801907 ~ 4844371 (-) | True | G276755 |
| TU328136 | lncRNA | downstream | 38664 | 4817108 ~ 4841754 (-) | False | G276761 |
| TU328119 | lncRNA | downstream | 81261 | 4798659 ~ 4799157 (-) | True | G276749 |
| XR_003403297.2 | lncRNA | upstream | 62541 | 4943549 ~ 4945278 (-) | True | LOC113531850 |
| TU328390 | lncRNA | upstream | 225872 | 5106880 ~ 5110968 (-) | True | G276980 |
| TU328395 | lncRNA | upstream | 243465 | 5124473 ~ 5125478 (-) | True | G276985 |
| XR_004579974.1 | lncRNA | upstream | 434899 | 5315907 ~ 5326714 (-) | True | LOC117599571 |
| TU328476 | lncRNA | upstream | 474892 | 5355900 ~ 5358204 (-) | True | G277065 |
| XM_026912198.2 | mRNA | downstream | 87621 | 4784128 ~ 4792797 (-) | True | psmc2 |
| XM_026909919.2 | mRNA | downstream | 536873 | 4331260 ~ 4343545 (-) | False | LOC113523868 |
| XM_034312956.1 | mRNA | downstream | 536873 | 4331260 ~ 4343545 (-) | True | LOC113523868 |
| XM_026909970.2 | mRNA | downstream | 819904 | 4044706 ~ 4060514 (-) | True | cd36 |
| XM_034313185.1 | mRNA | downstream | 935117 | 3919302 ~ 3945301 (-) | True | kdm7aa |
| XM_026922701.2 | mRNA | upstream | 16262 | 4897270 ~ 4917780 (-) | True | gys2 |
| XM_026922781.2 | mRNA | upstream | 44708 | 4925716 ~ 4938813 (-) | True | ldhba |
| XM_034313267.1 | mRNA | upstream | 73283 | 4954291 ~ 4965093 (-) | False | slc25a3a |
| XM_034313265.1 | mRNA | upstream | 73283 | 4954291 ~ 4965093 (-) | True | slc25a3a |
| XM_026923411.2 | mRNA | upstream | 85224 | 4966232 ~ 4984301 (-) | True | tmpoa |
| TU327987 | other | downstream | 141419 | 4734931 ~ 4738999 (-) | True | G276650 |
| LOC117599580 | other | downstream | 293426 | 4586256 ~ 4586992 (-) | True | LOC117599580 |
| LOC117599581 | other | downstream | 303380 | 4576470 ~ 4577038 (-) | True | LOC117599581 |
| LOC117599444 | other | downstream | 325323 | 4554619 ~ 4555095 (-) | True | LOC117599444 |
| LOC117599576 | other | downstream | 335264 | 4544541 ~ 4545154 (-) | True | LOC117599576 |
| XR_004579951.1 | other | upstream | 87245 | 4968253 ~ 4984315 (-) | False | tmpoa |
| TU328176 | other | upstream | 89306 | 4970314 ~ 4972245 (-) | False | tmpoa |
| TU329048 | other | upstream | 1100130 | 5981138 ~ 5991934 (-) | False | copg2 |
| TU329042 | other | upstream | 1101284 | 5982292 ~ 5984564 (-) | True | G277575 |
| XR_003403345.2 | other | upstream | 1152021 | 6033029 ~ 6033193 (-) | True | LOC113532437 |
