Item | Value |
---|---|
RNA id | TU328898 |
length | 389 |
lncRNA type | inter_gene |
GC content | 0.36 |
exon number | 1 |
gene id | G277447 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047612.1 |
NCBI id | CM018558.1 |
chromosome length | 23372418 |
location | 5559934 ~ 5560322 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU328891 | lncRNA | downstream | 111247 | 5447151 ~ 5448687 (-) | True | G277443 |
TU328477 | lncRNA | downstream | 200706 | 5358451 ~ 5359228 (-) | True | G277066 |
TU328476 | lncRNA | downstream | 201730 | 5355900 ~ 5358204 (-) | True | G277065 |
XR_004579974.1 | lncRNA | downstream | 233220 | 5315907 ~ 5326714 (-) | True | LOC117599571 |
TU328395 | lncRNA | downstream | 434456 | 5124473 ~ 5125478 (-) | True | G276985 |
TU328954 | lncRNA | upstream | 98162 | 5658484 ~ 5727420 (-) | False | G277494 |
TU328966 | lncRNA | upstream | 101489 | 5661811 ~ 5663019 (-) | True | G277506 |
TU328968 | lncRNA | upstream | 109246 | 5669568 ~ 5670534 (-) | True | G277508 |
TU328952 | lncRNA | upstream | 154188 | 5714510 ~ 5727420 (-) | True | G277494 |
TU328979 | lncRNA | upstream | 170523 | 5730845 ~ 5731069 (-) | True | G277519 |
XM_026923147.2 | mRNA | downstream | 8981 | 5529156 ~ 5550953 (-) | True | pah |
XM_034313041.1 | mRNA | downstream | 31114 | 5514082 ~ 5528820 (-) | True | th2 |
XM_034313035.1 | mRNA | downstream | 72927 | 5464313 ~ 5487007 (-) | False | parpbp |
XM_026923579.2 | mRNA | upstream | 5355 | 5565677 ~ 5625699 (-) | True | LOC113532275 |
XM_026922794.2 | mRNA | upstream | 224588 | 5784910 ~ 5790989 (-) | True | si:dkeyp-38g8.5 |
XM_026922873.2 | mRNA | upstream | 428870 | 5989192 ~ 6005129 (-) | True | copg2 |
XM_026923550.2 | mRNA | upstream | 449968 | 6010290 ~ 6011543 (-) | False | ucn3l |
XM_026923551.2 | mRNA | upstream | 449968 | 6010290 ~ 6011543 (-) | True | ucn3l |
XR_004579951.1 | other | downstream | 575619 | 4968253 ~ 4984315 (-) | False | tmpoa |
TU328176 | other | downstream | 587689 | 4970314 ~ 4972245 (-) | False | tmpoa |
TU327987 | other | downstream | 820935 | 4734931 ~ 4738999 (-) | True | G276650 |
LOC117599580 | other | downstream | 972942 | 4586256 ~ 4586992 (-) | True | LOC117599580 |
LOC117599581 | other | downstream | 982896 | 4576470 ~ 4577038 (-) | True | LOC117599581 |
TU329048 | other | upstream | 420816 | 5981138 ~ 5991934 (-) | False | copg2 |
TU329042 | other | upstream | 421970 | 5982292 ~ 5984564 (-) | True | G277575 |
XR_003403345.2 | other | upstream | 472707 | 6033029 ~ 6033193 (-) | True | LOC113532437 |
trnam-cau_46 | other | upstream | 542754 | 6103076 ~ 6103147 (-) | True | trnam-cau_46 |
trnal-aag_11 | other | upstream | 2033405 | 7593727 ~ 7593808 (-) | True | trnal-aag_11 |