Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU328962 |
| length | 680 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G277502 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 5761660 ~ 5766267 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU328979 | lncRNA | downstream | 30591 | 5730845 ~ 5731069 (-) | True | G277519 |
| TU328954 | lncRNA | downstream | 34240 | 5658484 ~ 5727420 (-) | False | G277494 |
| TU328952 | lncRNA | downstream | 34240 | 5714510 ~ 5727420 (-) | True | G277494 |
| TU328968 | lncRNA | downstream | 91126 | 5669568 ~ 5670534 (-) | True | G277508 |
| TU328966 | lncRNA | downstream | 98641 | 5661811 ~ 5663019 (-) | True | G277506 |
| TU328960 | lncRNA | upstream | 11735 | 5778002 ~ 5781171 (-) | True | G277500 |
| TU329033 | lncRNA | upstream | 194407 | 5960674 ~ 5997392 (-) | True | G277567 |
| TU329051 | lncRNA | upstream | 212683 | 5978950 ~ 5988344 (-) | True | G277577 |
| TU329374 | lncRNA | upstream | 1017392 | 6783659 ~ 6787471 (-) | True | G277878 |
| TU329377 | lncRNA | upstream | 1024995 | 6791262 ~ 6791475 (-) | True | G277881 |
| XM_026923579.2 | mRNA | downstream | 135961 | 5565677 ~ 5625699 (-) | True | LOC113532275 |
| XM_026923147.2 | mRNA | downstream | 210707 | 5529156 ~ 5550953 (-) | True | pah |
| XM_034313041.1 | mRNA | downstream | 232840 | 5514082 ~ 5528820 (-) | True | th2 |
| XM_034313034.1 | mRNA | downstream | 274657 | 5464313 ~ 5487003 (-) | False | parpbp |
| XM_026922794.2 | mRNA | upstream | 18643 | 5784910 ~ 5790989 (-) | True | si:dkeyp-38g8.5 |
| XM_026922873.2 | mRNA | upstream | 222925 | 5989192 ~ 6005129 (-) | True | copg2 |
| XM_026923550.2 | mRNA | upstream | 244023 | 6010290 ~ 6011543 (-) | False | ucn3l |
| XM_026923551.2 | mRNA | upstream | 244023 | 6010290 ~ 6011543 (-) | True | ucn3l |
| XM_026922928.2 | mRNA | upstream | 246757 | 6013024 ~ 6112709 (-) | False | col7a1l |
| XR_004579951.1 | other | downstream | 777345 | 4968253 ~ 4984315 (-) | False | tmpoa |
| TU328176 | other | downstream | 789415 | 4970314 ~ 4972245 (-) | False | tmpoa |
| TU327987 | other | downstream | 1022661 | 4734931 ~ 4738999 (-) | True | G276650 |
| LOC117599580 | other | downstream | 1174668 | 4586256 ~ 4586992 (-) | True | LOC117599580 |
| LOC117599581 | other | downstream | 1184622 | 4576470 ~ 4577038 (-) | True | LOC117599581 |
| TU329048 | other | upstream | 214871 | 5981138 ~ 5991934 (-) | False | copg2 |
| TU329042 | other | upstream | 216025 | 5982292 ~ 5984564 (-) | True | G277575 |
| XR_003403345.2 | other | upstream | 266762 | 6033029 ~ 6033193 (-) | True | LOC113532437 |
| trnam-cau_46 | other | upstream | 336809 | 6103076 ~ 6103147 (-) | True | trnam-cau_46 |
| trnal-aag_11 | other | upstream | 1827460 | 7593727 ~ 7593808 (-) | True | trnal-aag_11 |
