Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU328968 |
| length | 922 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G277508 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 5669568 ~ 5670534 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU328966 | lncRNA | downstream | 6549 | 5661811 ~ 5663019 (-) | True | G277506 |
| TU328898 | lncRNA | downstream | 109246 | 5559934 ~ 5560322 (-) | True | G277447 |
| TU328897 | lncRNA | downstream | 109300 | 5559934 ~ 5560268 (-) | False | G277447 |
| TU328891 | lncRNA | downstream | 220881 | 5447151 ~ 5448687 (-) | True | G277443 |
| TU328477 | lncRNA | downstream | 310340 | 5358451 ~ 5359228 (-) | True | G277066 |
| TU328952 | lncRNA | upstream | 43976 | 5714510 ~ 5727420 (-) | True | G277494 |
| TU328979 | lncRNA | upstream | 60311 | 5730845 ~ 5731069 (-) | True | G277519 |
| TU328962 | lncRNA | upstream | 91126 | 5761660 ~ 5766267 (-) | True | G277502 |
| TU328960 | lncRNA | upstream | 107468 | 5778002 ~ 5781171 (-) | True | G277500 |
| TU329033 | lncRNA | upstream | 290140 | 5960674 ~ 5997392 (-) | True | G277567 |
| XM_026923579.2 | mRNA | downstream | 43869 | 5565677 ~ 5625699 (-) | True | LOC113532275 |
| XM_026923147.2 | mRNA | downstream | 118615 | 5529156 ~ 5550953 (-) | True | pah |
| XM_034313041.1 | mRNA | downstream | 140748 | 5514082 ~ 5528820 (-) | True | th2 |
| XM_034313034.1 | mRNA | downstream | 182565 | 5464313 ~ 5487003 (-) | False | parpbp |
| XM_026922794.2 | mRNA | upstream | 114376 | 5784910 ~ 5790989 (-) | True | si:dkeyp-38g8.5 |
| XM_026922873.2 | mRNA | upstream | 318658 | 5989192 ~ 6005129 (-) | True | copg2 |
| XM_026923550.2 | mRNA | upstream | 339756 | 6010290 ~ 6011543 (-) | False | ucn3l |
| XM_026923551.2 | mRNA | upstream | 339756 | 6010290 ~ 6011543 (-) | True | ucn3l |
| XM_026922928.2 | mRNA | upstream | 342490 | 6013024 ~ 6112709 (-) | False | col7a1l |
| XR_004579951.1 | other | downstream | 685253 | 4968253 ~ 4984315 (-) | False | tmpoa |
| TU328176 | other | downstream | 697323 | 4970314 ~ 4972245 (-) | False | tmpoa |
| TU327987 | other | downstream | 930569 | 4734931 ~ 4738999 (-) | True | G276650 |
| LOC117599580 | other | downstream | 1082576 | 4586256 ~ 4586992 (-) | True | LOC117599580 |
| LOC117599581 | other | downstream | 1092530 | 4576470 ~ 4577038 (-) | True | LOC117599581 |
| TU329048 | other | upstream | 310604 | 5981138 ~ 5991934 (-) | False | copg2 |
| TU329042 | other | upstream | 311758 | 5982292 ~ 5984564 (-) | True | G277575 |
| XR_003403345.2 | other | upstream | 362495 | 6033029 ~ 6033193 (-) | True | LOC113532437 |
| trnam-cau_46 | other | upstream | 432542 | 6103076 ~ 6103147 (-) | True | trnam-cau_46 |
| trnal-aag_11 | other | upstream | 1923193 | 7593727 ~ 7593808 (-) | True | trnal-aag_11 |
