Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU329048 |
| length | 399 |
| RNA type | TUCP |
| GC content | 0.55 |
| exon number | 4 |
| gene id | copg2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 5981138 ~ 6005129 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU328960 | lncRNA | downstream | 199967 | 5778002 ~ 5781171 (-) | True | G277500 |
| TU328962 | lncRNA | downstream | 214871 | 5761660 ~ 5766267 (-) | True | G277502 |
| TU328979 | lncRNA | downstream | 250069 | 5730845 ~ 5731069 (-) | True | G277519 |
| TU328954 | lncRNA | downstream | 253718 | 5658484 ~ 5727420 (-) | False | G277494 |
| TU328952 | lncRNA | downstream | 253718 | 5714510 ~ 5727420 (-) | True | G277494 |
| TU329374 | lncRNA | upstream | 791725 | 6783659 ~ 6787471 (-) | True | G277878 |
| TU329377 | lncRNA | upstream | 799328 | 6791262 ~ 6791475 (-) | True | G277881 |
| TU329813 | lncRNA | upstream | 885818 | 6877752 ~ 6878941 (-) | True | G278225 |
| TU329864 | lncRNA | upstream | 1079812 | 7071746 ~ 7074585 (-) | True | G278265 |
| TU329874 | lncRNA | upstream | 1237071 | 7229005 ~ 7229440 (-) | True | G278275 |
| XM_026922794.2 | mRNA | downstream | 190149 | 5784910 ~ 5790989 (-) | True | si:dkeyp-38g8.5 |
| XM_026923579.2 | mRNA | downstream | 355439 | 5565677 ~ 5625699 (-) | True | LOC113532275 |
| XM_026923147.2 | mRNA | downstream | 430185 | 5529156 ~ 5550953 (-) | True | pah |
| XM_034313041.1 | mRNA | downstream | 452318 | 5514082 ~ 5528820 (-) | True | th2 |
| XM_034313035.1 | mRNA | downstream | 494131 | 5464313 ~ 5487007 (-) | False | parpbp |
| XM_026923550.2 | mRNA | upstream | 18356 | 6010290 ~ 6011543 (-) | False | ucn3l |
| XM_026923551.2 | mRNA | upstream | 18356 | 6010290 ~ 6011543 (-) | True | ucn3l |
| XM_026922928.2 | mRNA | upstream | 21090 | 6013024 ~ 6112709 (-) | False | col7a1l |
| XM_026922930.2 | mRNA | upstream | 21090 | 6013024 ~ 6112664 (-) | False | col7a1l |
| XM_034313198.1 | mRNA | upstream | 21090 | 6013024 ~ 6112664 (-) | False | col7a1l |
| XR_004579951.1 | other | downstream | 996823 | 4968253 ~ 4984315 (-) | False | tmpoa |
| TU328176 | other | downstream | 1008893 | 4970314 ~ 4972245 (-) | False | tmpoa |
| TU327987 | other | downstream | 1242139 | 4734931 ~ 4738999 (-) | True | G276650 |
| LOC117599580 | other | downstream | 1394146 | 4586256 ~ 4586992 (-) | True | LOC117599580 |
| LOC117599581 | other | downstream | 1404100 | 4576470 ~ 4577038 (-) | True | LOC117599581 |
| XR_003403345.2 | other | upstream | 41095 | 6033029 ~ 6033193 (-) | True | LOC113532437 |
| trnam-cau_46 | other | upstream | 111142 | 6103076 ~ 6103147 (-) | True | trnam-cau_46 |
| trnal-aag_11 | other | upstream | 1601793 | 7593727 ~ 7593808 (-) | True | trnal-aag_11 |
| TU330291 | other | upstream | 2061154 | 8053088 ~ 8068077 (-) | True | G278634 |
| TU330637 | other | upstream | 2226627 | 8218561 ~ 8219680 (-) | True | G278912 |
