Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU330291 |
| length | 646 |
| RNA type | TUCP |
| GC content | 0.52 |
| exon number | 3 |
| gene id | G278634 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 8053088 ~ 8068077 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU330235 | lncRNA | downstream | 85667 | 7966819 ~ 7967421 (-) | False | avpr1ab |
| TU330151 | lncRNA | downstream | 174071 | 7796835 ~ 7879017 (-) | True | G278520 |
| XR_004579997.1 | lncRNA | downstream | 518806 | 7530784 ~ 7534282 (-) | False | LOC117599592 |
| XR_004579998.1 | lncRNA | downstream | 518807 | 7530784 ~ 7534281 (-) | False | LOC117599592 |
| XR_004579996.1 | lncRNA | downstream | 518807 | 7530784 ~ 7534281 (-) | True | LOC117599592 |
| TU330636 | lncRNA | upstream | 148936 | 8217013 ~ 8217293 (-) | True | G278911 |
| TU330657 | lncRNA | upstream | 170897 | 8238974 ~ 8239676 (-) | True | G278920 |
| TU330707 | lncRNA | upstream | 321421 | 8389498 ~ 8390559 (-) | True | G278963 |
| TU330836 | lncRNA | upstream | 544041 | 8612118 ~ 8612342 (-) | True | G279064 |
| XR_004579873.1 | lncRNA | upstream | 630353 | 8698430 ~ 8698791 (-) | True | LOC117599455 |
| XM_026922687.2 | mRNA | downstream | 82517 | 7966873 ~ 7970571 (-) | True | avpr1ab |
| XM_034313092.1 | mRNA | downstream | 96479 | 7946410 ~ 7956609 (-) | False | hcfc2 |
| XM_034313093.1 | mRNA | downstream | 96898 | 7946410 ~ 7956190 (-) | False | hcfc2 |
| XM_026922997.2 | mRNA | downstream | 96924 | 7946410 ~ 7956164 (-) | False | hcfc2 |
| XM_026922995.2 | mRNA | downstream | 96924 | 7946410 ~ 7956164 (-) | True | hcfc2 |
| XM_026922658.2 | mRNA | upstream | 35397 | 8103474 ~ 8114786 (-) | True | c18h12orf66 |
| XM_026922659.2 | mRNA | upstream | 35397 | 8103474 ~ 8114034 (-) | False | c18h12orf66 |
| XM_026923834.2 | mRNA | upstream | 153475 | 8221552 ~ 8226121 (-) | False | si:ch73-139j3.4 |
| XM_026923833.2 | mRNA | upstream | 153475 | 8221552 ~ 8226121 (-) | True | si:ch73-139j3.4 |
| XM_026923517.2 | mRNA | upstream | 171678 | 8239755 ~ 8247746 (-) | True | tymp |
| trnal-aag_11 | other | downstream | 459280 | 7593727 ~ 7593808 (-) | True | trnal-aag_11 |
| trnam-cau_46 | other | downstream | 1949941 | 6103076 ~ 6103147 (-) | True | trnam-cau_46 |
| XR_003403345.2 | other | downstream | 2019895 | 6033029 ~ 6033193 (-) | True | LOC113532437 |
| TU329048 | other | downstream | 2061154 | 5981138 ~ 5991934 (-) | False | copg2 |
| TU329042 | other | downstream | 2068524 | 5982292 ~ 5984564 (-) | True | G277575 |
| TU330637 | other | upstream | 150484 | 8218561 ~ 8219680 (-) | True | G278912 |
| XR_003403340.2 | other | upstream | 741143 | 8809220 ~ 8809338 (-) | True | LOC113532431 |
| TU331209 | other | upstream | 1139274 | 9207351 ~ 9208563 (-) | True | G279415 |
| trnay-gua_2 | other | upstream | 1554456 | 9622533 ~ 9622619 (-) | True | trnay-gua_2 |
| TU332243 | other | upstream | 2201680 | 10269757 ~ 10296121 (-) | False | LOC113532274 |
