Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU330707 |
| length | 1062 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G278963 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 8389498 ~ 8390559 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU330657 | lncRNA | downstream | 149822 | 8238974 ~ 8239676 (-) | True | G278920 |
| TU330636 | lncRNA | downstream | 172205 | 8217013 ~ 8217293 (-) | True | G278911 |
| TU330235 | lncRNA | downstream | 422077 | 7966819 ~ 7967421 (-) | False | avpr1ab |
| TU330151 | lncRNA | downstream | 510481 | 7796835 ~ 7879017 (-) | True | G278520 |
| XR_004579998.1 | lncRNA | downstream | 855217 | 7530784 ~ 7534281 (-) | False | LOC117599592 |
| TU330836 | lncRNA | upstream | 221559 | 8612118 ~ 8612342 (-) | True | G279064 |
| XR_004579873.1 | lncRNA | upstream | 307871 | 8698430 ~ 8698791 (-) | True | LOC117599455 |
| TU331172 | lncRNA | upstream | 803057 | 9193616 ~ 9194003 (-) | True | G279382 |
| TU331392 | lncRNA | upstream | 945777 | 9336336 ~ 9337530 (-) | True | G279588 |
| TU331405 | lncRNA | upstream | 995574 | 9386133 ~ 9387789 (-) | False | G279592 |
| XM_026923666.2 | mRNA | downstream | 1141 | 8358310 ~ 8388357 (-) | False | tspan9b |
| XM_026923665.2 | mRNA | downstream | 16992 | 8358310 ~ 8372506 (-) | True | tspan9b |
| XM_026922634.2 | mRNA | downstream | 55009 | 8322995 ~ 8334489 (-) | False | dmtf1 |
| XM_026922633.2 | mRNA | downstream | 55009 | 8322995 ~ 8334489 (-) | True | dmtf1 |
| XM_026922676.2 | mRNA | downstream | 77829 | 8301479 ~ 8311669 (-) | True | dclre1c |
| XM_034313192.1 | mRNA | upstream | 119 | 8390678 ~ 8426367 (-) | True | mical3b |
| XM_034313193.1 | mRNA | upstream | 120 | 8390679 ~ 8426358 (-) | False | mical3b |
| XM_026922835.2 | mRNA | upstream | 121 | 8390680 ~ 8426356 (-) | False | mical3b |
| XM_026922838.2 | mRNA | upstream | 121 | 8390680 ~ 8426355 (-) | False | mical3b |
| XM_026922837.2 | mRNA | upstream | 121 | 8390680 ~ 8426355 (-) | False | mical3b |
| TU330637 | other | downstream | 169818 | 8218561 ~ 8219680 (-) | True | G278912 |
| TU330291 | other | downstream | 321421 | 8053088 ~ 8068077 (-) | True | G278634 |
| trnal-aag_11 | other | downstream | 795690 | 7593727 ~ 7593808 (-) | True | trnal-aag_11 |
| trnam-cau_46 | other | downstream | 2286351 | 6103076 ~ 6103147 (-) | True | trnam-cau_46 |
| XR_003403345.2 | other | downstream | 2356305 | 6033029 ~ 6033193 (-) | True | LOC113532437 |
| XR_003403340.2 | other | upstream | 418661 | 8809220 ~ 8809338 (-) | True | LOC113532431 |
| TU331209 | other | upstream | 816792 | 9207351 ~ 9208563 (-) | True | G279415 |
| trnay-gua_2 | other | upstream | 1231974 | 9622533 ~ 9622619 (-) | True | trnay-gua_2 |
| TU332243 | other | upstream | 1879198 | 10269757 ~ 10296121 (-) | False | LOC113532274 |
| XR_004579975.1 | other | upstream | 2604546 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
