Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU331436 |
| length | 856 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G279620 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 9484093 ~ 9484948 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU331406 | lncRNA | downstream | 94346 | 9386133 ~ 9389747 (-) | True | G279592 |
| TU331405 | lncRNA | downstream | 96304 | 9386133 ~ 9387789 (-) | False | G279592 |
| TU331392 | lncRNA | downstream | 146563 | 9336336 ~ 9337530 (-) | True | G279588 |
| TU331172 | lncRNA | downstream | 290090 | 9193616 ~ 9194003 (-) | True | G279382 |
| XR_004579873.1 | lncRNA | downstream | 785302 | 8698430 ~ 8698791 (-) | True | LOC117599455 |
| TU331437 | lncRNA | upstream | 119 | 9485067 ~ 9485769 (-) | True | G279621 |
| TU331440 | lncRNA | upstream | 33038 | 9517986 ~ 9519727 (-) | True | G279624 |
| TU331441 | lncRNA | upstream | 34885 | 9519833 ~ 9520078 (-) | True | G279625 |
| TU331457 | lncRNA | upstream | 48274 | 9533222 ~ 9533421 (-) | True | G279641 |
| TU331545 | lncRNA | upstream | 139651 | 9624599 ~ 9625119 (-) | True | G279728 |
| XM_026922643.2 | mRNA | downstream | 60825 | 9392029 ~ 9423268 (-) | True | mkln1 |
| XM_034313366.1 | mRNA | downstream | 125043 | 9350878 ~ 9359050 (-) | True | LOC113531956 |
| XM_026923675.2 | mRNA | downstream | 137047 | 9338768 ~ 9347046 (-) | True | LOC113532331 |
| XM_026923676.2 | mRNA | downstream | 137050 | 9338768 ~ 9347043 (-) | False | LOC113532331 |
| XM_026923677.2 | mRNA | downstream | 137050 | 9338768 ~ 9347043 (-) | False | LOC113532331 |
| XM_026923453.2 | mRNA | upstream | 74963 | 9559911 ~ 9593266 (-) | True | asb13a.2 |
| XM_026923304.2 | mRNA | upstream | 109510 | 9594458 ~ 9600035 (-) | True | asb13a.1 |
| XM_026923063.2 | mRNA | upstream | 115629 | 9600577 ~ 9615300 (-) | True | gdi2 |
| XM_034312996.1 | mRNA | upstream | 132460 | 9617408 ~ 9623595 (-) | True | ankrd16 |
| XM_034312997.1 | mRNA | upstream | 132460 | 9617408 ~ 9623591 (-) | False | ankrd16 |
| TU331209 | other | downstream | 275530 | 9207351 ~ 9208563 (-) | True | G279415 |
| XR_003403340.2 | other | downstream | 674755 | 8809220 ~ 8809338 (-) | True | LOC113532431 |
| TU330637 | other | downstream | 1264413 | 8218561 ~ 8219680 (-) | True | G278912 |
| TU330291 | other | downstream | 1416016 | 8053088 ~ 8068077 (-) | True | G278634 |
| trnal-aag_11 | other | downstream | 1890285 | 7593727 ~ 7593808 (-) | True | trnal-aag_11 |
| trnay-gua_2 | other | upstream | 137585 | 9622533 ~ 9622619 (-) | True | trnay-gua_2 |
| TU332243 | other | upstream | 784809 | 10269757 ~ 10296121 (-) | False | LOC113532274 |
| XR_004579975.1 | other | upstream | 1510157 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU332827 | other | upstream | 1753987 | 11238935 ~ 11259392 (-) | True | vegfab |
| TU333108 | other | upstream | 2101356 | 11586304 ~ 11588024 (-) | True | G281074 |
