Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU332122 |
| length | 272 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G280233 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 10087849 ~ 10088120 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU332117 | lncRNA | downstream | 9493 | 10078086 ~ 10078356 (-) | True | G280228 |
| TU331860 | lncRNA | downstream | 83037 | 10004341 ~ 10004812 (-) | True | G280002 |
| TU331824 | lncRNA | downstream | 140313 | 9947331 ~ 9947536 (-) | True | G279967 |
| TU331737 | lncRNA | downstream | 196616 | 9890632 ~ 9891233 (-) | False | cracr2ab |
| TU331669 | lncRNA | downstream | 283446 | 9804178 ~ 9804403 (-) | True | G279832 |
| XR_004579870.1 | lncRNA | upstream | 167852 | 10255972 ~ 10296198 (-) | True | LOC113532274 |
| TU332242 | lncRNA | upstream | 206884 | 10295004 ~ 10296121 (-) | False | LOC113532274 |
| TU332301 | lncRNA | upstream | 330798 | 10418918 ~ 10513153 (-) | True | G280384 |
| TU332306 | lncRNA | upstream | 342511 | 10430631 ~ 10435846 (-) | True | G280389 |
| TU332320 | lncRNA | upstream | 375834 | 10463954 ~ 10465630 (-) | True | G280398 |
| XM_026922867.2 | mRNA | downstream | 72059 | 10007198 ~ 10015790 (-) | True | pik3cg |
| XM_026922868.2 | mRNA | downstream | 72060 | 10007198 ~ 10015789 (-) | False | pik3cg |
| XM_026923293.2 | mRNA | downstream | 189897 | 9895085 ~ 9897952 (-) | True | ccdc59 |
| XM_026923840.2 | mRNA | downstream | 195463 | 9878481 ~ 9892386 (-) | True | cracr2ab |
| XM_026922569.2 | mRNA | upstream | 359545 | 10447665 ~ 10450902 (-) | False | lmod2b |
| XM_026922568.2 | mRNA | upstream | 359545 | 10447665 ~ 10450895 (-) | True | lmod2b |
| XM_034313381.1 | mRNA | upstream | 363458 | 10451578 ~ 10461046 (-) | True | asb15b |
| XM_034313222.1 | mRNA | upstream | 382416 | 10470536 ~ 10512149 (-) | False | ptprz1b |
| XM_026923202.2 | mRNA | upstream | 382416 | 10470536 ~ 10512148 (-) | False | ptprz1b |
| trnay-gua_2 | other | downstream | 465230 | 9622533 ~ 9622619 (-) | True | trnay-gua_2 |
| TU331209 | other | downstream | 879286 | 9207351 ~ 9208563 (-) | True | G279415 |
| XR_003403340.2 | other | downstream | 1278511 | 8809220 ~ 8809338 (-) | True | LOC113532431 |
| TU330637 | other | downstream | 1868169 | 8218561 ~ 8219680 (-) | True | G278912 |
| TU330291 | other | downstream | 2019772 | 8053088 ~ 8068077 (-) | True | G278634 |
| TU332243 | other | upstream | 181637 | 10269757 ~ 10296121 (-) | False | LOC113532274 |
| XR_004579975.1 | other | upstream | 906985 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU332827 | other | upstream | 1150815 | 11238935 ~ 11259392 (-) | True | vegfab |
| TU333108 | other | upstream | 1498184 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU333129 | other | upstream | 1569770 | 11657890 ~ 11660327 (-) | True | G281092 |
