Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU332301 |
| length | 653 |
| lncRNA type | read_through |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G280384 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 10418918 ~ 10513153 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579870.1 | lncRNA | downstream | 122720 | 10255972 ~ 10296198 (-) | True | LOC113532274 |
| TU332242 | lncRNA | downstream | 122797 | 10295004 ~ 10296121 (-) | False | LOC113532274 |
| TU332122 | lncRNA | downstream | 330798 | 10087849 ~ 10088120 (-) | True | G280233 |
| TU332117 | lncRNA | downstream | 340562 | 10078086 ~ 10078356 (-) | True | G280228 |
| TU331860 | lncRNA | downstream | 414106 | 10004341 ~ 10004812 (-) | True | G280002 |
| TU332463 | lncRNA | upstream | 263610 | 10776763 ~ 10777897 (-) | True | G280527 |
| TU332558 | lncRNA | upstream | 270208 | 10783361 ~ 10784293 (-) | True | G280615 |
| TU332595 | lncRNA | upstream | 393020 | 10906173 ~ 10908630 (-) | True | G280640 |
| TU332613 | lncRNA | upstream | 417585 | 10930738 ~ 10930980 (-) | True | G280652 |
| TU332738 | lncRNA | upstream | 566015 | 11079168 ~ 11079487 (-) | False | sobpb |
| XM_026922867.2 | mRNA | downstream | 403128 | 10007198 ~ 10015790 (-) | True | pik3cg |
| XM_026922868.2 | mRNA | downstream | 403129 | 10007198 ~ 10015789 (-) | False | pik3cg |
| XM_026923293.2 | mRNA | downstream | 520966 | 9895085 ~ 9897952 (-) | True | ccdc59 |
| XM_026923840.2 | mRNA | downstream | 526532 | 9878481 ~ 9892386 (-) | True | cracr2ab |
| XM_026922702.2 | mRNA | upstream | 19628 | 10532781 ~ 10548341 (-) | True | slc13a4 |
| XM_026923330.2 | mRNA | upstream | 105765 | 10618918 ~ 10629763 (-) | False | LOC113532144 |
| XM_026923329.2 | mRNA | upstream | 105765 | 10618918 ~ 10629763 (-) | True | LOC113532144 |
| XM_026922785.2 | mRNA | upstream | 271175 | 10784328 ~ 10828385 (-) | True | ptprb |
| XM_026923231.2 | mRNA | upstream | 317733 | 10830886 ~ 10885436 (-) | False | ptprr |
| TU332243 | other | downstream | 122797 | 10269757 ~ 10296121 (-) | False | LOC113532274 |
| trnay-gua_2 | other | downstream | 796299 | 9622533 ~ 9622619 (-) | True | trnay-gua_2 |
| TU331209 | other | downstream | 1210355 | 9207351 ~ 9208563 (-) | True | G279415 |
| XR_003403340.2 | other | downstream | 1609580 | 8809220 ~ 8809338 (-) | True | LOC113532431 |
| TU330637 | other | downstream | 2199238 | 8218561 ~ 8219680 (-) | True | G278912 |
| XR_004579975.1 | other | upstream | 481952 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU332827 | other | upstream | 725782 | 11238935 ~ 11259392 (-) | True | vegfab |
| TU333108 | other | upstream | 1073151 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU333129 | other | upstream | 1144737 | 11657890 ~ 11660327 (-) | True | G281092 |
| XR_003403346.2 | other | upstream | 2067770 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
