Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU332738 |
| length | 320 |
| lncRNA type | sense_over |
| GC content | 0.32 |
| exon number | 1 |
| gene id | sobpb |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 11079168 ~ 11094176 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU332613 | lncRNA | downstream | 148188 | 10930738 ~ 10930980 (-) | True | G280652 |
| TU332595 | lncRNA | downstream | 170538 | 10906173 ~ 10908630 (-) | True | G280640 |
| TU332558 | lncRNA | downstream | 294875 | 10783361 ~ 10784293 (-) | True | G280615 |
| TU332463 | lncRNA | downstream | 301271 | 10776763 ~ 10777897 (-) | True | G280527 |
| TU332265 | lncRNA | downstream | 608793 | 10468686 ~ 10470375 (-) | True | G280360 |
| TU332792 | lncRNA | upstream | 90399 | 11169886 ~ 11172446 (-) | True | G280812 |
| TU332799 | lncRNA | upstream | 100444 | 11179931 ~ 11182051 (-) | True | G280817 |
| TU332800 | lncRNA | upstream | 103579 | 11183066 ~ 11184143 (-) | True | G280818 |
| TU332834 | lncRNA | upstream | 180304 | 11259791 ~ 11259991 (-) | True | G280841 |
| TU333037 | lncRNA | upstream | 279875 | 11359362 ~ 11359636 (-) | True | G281021 |
| XM_026923844.2 | mRNA | downstream | 2406 | 11067737 ~ 11076762 (-) | True | mapre3b |
| XM_026923287.2 | mRNA | downstream | 13221 | 11053196 ~ 11065947 (-) | True | tmem214 |
| XM_026923528.2 | mRNA | downstream | 28562 | 11035084 ~ 11050606 (-) | False | agbl5 |
| XM_034313318.1 | mRNA | downstream | 28562 | 11035084 ~ 11050606 (-) | False | agbl5 |
| XM_034313320.1 | mRNA | downstream | 28562 | 11042187 ~ 11050606 (-) | True | agbl5 |
| XM_026922823.2 | mRNA | upstream | 159749 | 11239236 ~ 11259412 (-) | False | vegfab |
| XM_026922824.2 | mRNA | upstream | 159749 | 11239236 ~ 11259411 (-) | False | vegfab |
| XM_034313377.1 | mRNA | upstream | 249541 | 11329028 ~ 11344755 (-) | True | rsph9 |
| XM_026923791.2 | mRNA | upstream | 256581 | 11336068 ~ 11344755 (-) | False | rsph9 |
| XM_026923140.2 | mRNA | upstream | 276573 | 11356060 ~ 11380183 (-) | False | tmem63a |
| XR_004579975.1 | other | downstream | 72025 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU332243 | other | downstream | 783047 | 10269757 ~ 10296121 (-) | False | LOC113532274 |
| trnay-gua_2 | other | downstream | 1456549 | 9622533 ~ 9622619 (-) | True | trnay-gua_2 |
| TU331209 | other | downstream | 1870605 | 9207351 ~ 9208563 (-) | True | G279415 |
| XR_003403340.2 | other | downstream | 2269830 | 8809220 ~ 8809338 (-) | True | LOC113532431 |
| TU332827 | other | upstream | 159448 | 11238935 ~ 11259392 (-) | True | vegfab |
| TU333108 | other | upstream | 506817 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU333129 | other | upstream | 578403 | 11657890 ~ 11660327 (-) | True | G281092 |
| XR_003403346.2 | other | upstream | 1501436 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU335292 | other | upstream | 4094861 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
