Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU334237 |
| length | 1184 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | G282006 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 13320173 ~ 13373048 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU334201 | lncRNA | downstream | 34455 | 13259152 ~ 13285718 (-) | True | G281981 |
| TU334183 | lncRNA | downstream | 109680 | 13168675 ~ 13210493 (-) | True | G281964 |
| XR_003403338.2 | lncRNA | downstream | 172815 | 13146282 ~ 13147358 (-) | True | LOC113532391 |
| TU333645 | lncRNA | downstream | 842544 | 12476264 ~ 12477629 (-) | True | G281527 |
| TU333624 | lncRNA | downstream | 861081 | 12457563 ~ 12459092 (-) | True | G281510 |
| TU334285 | lncRNA | upstream | 86199 | 13407613 ~ 13409326 (-) | True | G282047 |
| TU334298 | lncRNA | upstream | 106243 | 13427657 ~ 13427872 (-) | True | G282060 |
| TU334376 | lncRNA | upstream | 237845 | 13559259 ~ 13563946 (-) | True | G282116 |
| XR_004579994.1 | lncRNA | upstream | 250386 | 13571800 ~ 13573687 (-) | True | LOC117599591 |
| TU334388 | lncRNA | upstream | 252133 | 13573547 ~ 13575375 (-) | False | LOC117599591 |
| XM_026923473.2 | mRNA | downstream | 9910 | 13304454 ~ 13310263 (-) | True | depdc4 |
| XM_034313190.1 | mRNA | downstream | 15894 | 13276926 ~ 13304279 (-) | False | scyl2 |
| XM_026923049.2 | mRNA | downstream | 17666 | 13276926 ~ 13302507 (-) | True | scyl2 |
| XM_026923050.2 | mRNA | downstream | 17668 | 13276926 ~ 13302505 (-) | False | scyl2 |
| XM_026922632.2 | mRNA | downstream | 121248 | 13188862 ~ 13198925 (-) | True | tnni1d |
| XM_026922690.2 | mRNA | upstream | 3987 | 13325401 ~ 13338373 (-) | True | metap2a |
| XM_034313097.1 | mRNA | upstream | 23330 | 13344744 ~ 13374285 (-) | False | vezt |
| XM_026923174.2 | mRNA | upstream | 23330 | 13344744 ~ 13364503 (-) | False | vezt |
| XM_026923173.2 | mRNA | upstream | 23330 | 13344744 ~ 13364503 (-) | True | vezt |
| XM_026923198.2 | mRNA | upstream | 144788 | 13466202 ~ 13501821 (-) | True | lamb1b |
| XR_003403346.2 | other | downstream | 739110 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 1659846 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 1732149 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 2060781 | 11238935 ~ 11259392 (-) | True | vegfab |
| XR_004579975.1 | other | downstream | 2313030 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU335292 | other | upstream | 1852934 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| TU336422 | other | upstream | 3637110 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 3782151 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 4657371 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 4657371 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
