Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU334298 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G282060 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 13427657 ~ 13427872 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko05322 | Systemic lupus erythematosus |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU334285 | lncRNA | downstream | 18331 | 13407613 ~ 13409326 (-) | True | G282047 |
| TU334236 | lncRNA | downstream | 54609 | 13320173 ~ 13373048 (-) | False | G282006 |
| TU334237 | lncRNA | downstream | 106243 | 13320173 ~ 13321414 (-) | True | G282006 |
| TU334201 | lncRNA | downstream | 141939 | 13259152 ~ 13285718 (-) | True | G281981 |
| TU334183 | lncRNA | downstream | 217164 | 13168675 ~ 13210493 (-) | True | G281964 |
| TU334376 | lncRNA | upstream | 131387 | 13559259 ~ 13563946 (-) | True | G282116 |
| XR_004579994.1 | lncRNA | upstream | 143928 | 13571800 ~ 13573687 (-) | True | LOC117599591 |
| TU334388 | lncRNA | upstream | 145675 | 13573547 ~ 13575375 (-) | False | LOC117599591 |
| TU334559 | lncRNA | upstream | 405376 | 13833248 ~ 13837431 (-) | True | G282279 |
| TU334567 | lncRNA | upstream | 410786 | 13838658 ~ 13840594 (-) | True | G282283 |
| XM_034313097.1 | mRNA | downstream | 53372 | 13344744 ~ 13374285 (-) | False | vezt |
| XM_026923174.2 | mRNA | downstream | 63154 | 13344744 ~ 13364503 (-) | False | vezt |
| XM_026923173.2 | mRNA | downstream | 63154 | 13344744 ~ 13364503 (-) | True | vezt |
| XM_026922690.2 | mRNA | downstream | 89284 | 13325401 ~ 13338373 (-) | True | metap2a |
| XM_026923473.2 | mRNA | downstream | 117394 | 13304454 ~ 13310263 (-) | True | depdc4 |
| XM_026923198.2 | mRNA | upstream | 38330 | 13466202 ~ 13501821 (-) | True | lamb1b |
| XM_026923829.2 | mRNA | upstream | 81360 | 13509232 ~ 13522323 (-) | True | acot18 |
| XM_026923828.2 | mRNA | upstream | 81360 | 13509232 ~ 13522319 (-) | False | acot18 |
| XM_026923211.2 | mRNA | upstream | 105047 | 13532919 ~ 13549503 (-) | False | LOC113532074 |
| XM_026923212.2 | mRNA | upstream | 105047 | 13532919 ~ 13549503 (-) | False | LOC113532074 |
| XR_003403346.2 | other | downstream | 846594 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 1767330 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 1839633 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 2168265 | 11238935 ~ 11259392 (-) | True | vegfab |
| XR_004579975.1 | other | downstream | 2420514 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU335292 | other | upstream | 1746476 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| TU336422 | other | upstream | 3530652 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 3675693 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 4550913 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 4550913 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
