Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU334559 |
| length | 655 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 5 |
| gene id | G282279 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 13833248 ~ 13837431 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU334388 | lncRNA | downstream | 257873 | 13573547 ~ 13575375 (-) | False | LOC117599591 |
| XR_004579994.1 | lncRNA | downstream | 259561 | 13571800 ~ 13573687 (-) | True | LOC117599591 |
| TU334376 | lncRNA | downstream | 269302 | 13559259 ~ 13563946 (-) | True | G282116 |
| TU334298 | lncRNA | downstream | 405376 | 13427657 ~ 13427872 (-) | True | G282060 |
| TU334285 | lncRNA | downstream | 423922 | 13407613 ~ 13409326 (-) | True | G282047 |
| TU334567 | lncRNA | upstream | 1227 | 13838658 ~ 13840594 (-) | True | G282283 |
| TU334636 | lncRNA | upstream | 100225 | 13937656 ~ 13937879 (-) | True | G282349 |
| TU334657 | lncRNA | upstream | 116568 | 13953999 ~ 13969897 (-) | False | G282368 |
| TU334658 | lncRNA | upstream | 131092 | 13968523 ~ 13969897 (-) | True | G282368 |
| TU334694 | lncRNA | upstream | 495501 | 14332932 ~ 14333132 (-) | True | G282404 |
| XM_026922586.2 | mRNA | downstream | 3740 | 13808409 ~ 13829508 (-) | True | LOC113531720 |
| XM_026923772.2 | mRNA | downstream | 45814 | 13782762 ~ 13787434 (-) | True | LOC113532385 |
| XM_034313141.1 | mRNA | downstream | 69458 | 13751523 ~ 13763790 (-) | True | LOC117599536 |
| XM_026923135.2 | mRNA | downstream | 108618 | 13665323 ~ 13724630 (-) | False | sfmbt2 |
| XM_026923134.2 | mRNA | downstream | 108618 | 13665323 ~ 13724630 (-) | True | sfmbt2 |
| XM_026923243.2 | mRNA | upstream | 14112 | 13851543 ~ 13858673 (-) | True | kin |
| XM_034313070.1 | mRNA | upstream | 1036419 | 14873850 ~ 14885572 (-) | False | LOC113531970 |
| XM_026922975.2 | mRNA | upstream | 1036420 | 14873851 ~ 14885572 (-) | True | LOC113531970 |
| XM_026922976.2 | mRNA | upstream | 1195217 | 15032648 ~ 15047471 (-) | True | slc6a1l |
| XM_034313261.1 | mRNA | upstream | 1222081 | 15059512 ~ 15078787 (-) | False | LOC113531968 |
| XR_003403346.2 | other | downstream | 1252185 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 2172921 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 2245224 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 2573856 | 11238935 ~ 11259392 (-) | True | vegfab |
| XR_004579975.1 | other | downstream | 2826105 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU335292 | other | upstream | 1336917 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| TU336422 | other | upstream | 3121093 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 3266134 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 4141354 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 4141354 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
