Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU335044 |
| length | 217 |
| lncRNA type | read_through |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G282718 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 14812922 ~ 15105995 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU334999 | lncRNA | downstream | 73485 | 14739216 ~ 14739437 (-) | True | G282673 |
| TU334974 | lncRNA | downstream | 81918 | 14715045 ~ 14731004 (-) | False | G282649 |
| TU334971 | lncRNA | downstream | 81918 | 14721809 ~ 14731004 (-) | True | G282649 |
| TU334700 | lncRNA | downstream | 422365 | 14389823 ~ 14390557 (-) | True | G282410 |
| TU334699 | lncRNA | downstream | 439409 | 14372731 ~ 14373513 (-) | True | G282409 |
| XR_003403333.2 | lncRNA | upstream | 103353 | 15209348 ~ 15213255 (-) | False | LOC113532334 |
| XR_003403332.2 | lncRNA | upstream | 103353 | 15209348 ~ 15213255 (-) | True | LOC113532334 |
| TU335298 | lncRNA | upstream | 164999 | 15270994 ~ 15271200 (-) | True | G282950 |
| TU335356 | lncRNA | upstream | 244711 | 15350706 ~ 15353441 (-) | True | G282999 |
| TU335389 | lncRNA | upstream | 281953 | 15387948 ~ 15390101 (-) | True | G283022 |
| XM_026923243.2 | mRNA | downstream | 954249 | 13851543 ~ 13858673 (-) | True | kin |
| XM_026922586.2 | mRNA | downstream | 983414 | 13808409 ~ 13829508 (-) | True | LOC113531720 |
| XM_026923772.2 | mRNA | downstream | 1025488 | 13782762 ~ 13787434 (-) | True | LOC113532385 |
| XM_034313141.1 | mRNA | downstream | 1049132 | 13751523 ~ 13763790 (-) | True | LOC117599536 |
| XM_034313246.1 | mRNA | downstream | 1088293 | 13665323 ~ 13724629 (-) | False | sfmbt2 |
| XM_026922587.2 | mRNA | upstream | 10232 | 15116227 ~ 15118561 (-) | True | LOC113531721 |
| XM_026923156.2 | mRNA | upstream | 16739 | 15122734 ~ 15138477 (-) | False | LOC113532053 |
| XM_026923158.2 | mRNA | upstream | 16739 | 15122734 ~ 15135324 (-) | True | LOC113532053 |
| XM_026923159.2 | mRNA | upstream | 16739 | 15122734 ~ 15132995 (-) | False | LOC113532053 |
| XM_026923155.2 | mRNA | upstream | 16739 | 15122734 ~ 15132995 (-) | False | LOC113532053 |
| XR_003403346.2 | other | downstream | 2231859 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 3152595 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 3224898 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 3553530 | 11238935 ~ 11259392 (-) | True | vegfab |
| XR_004579975.1 | other | downstream | 3805779 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU335292 | other | upstream | 68353 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| TU336422 | other | upstream | 1852529 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 1997570 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 2872790 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 2872790 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
