Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU336663 |
| length | 247 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G284165 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 17594653 ~ 17594899 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU336631 | lncRNA | downstream | 29698 | 17558407 ~ 17564955 (-) | True | G284145 |
| TU336632 | lncRNA | downstream | 32846 | 17558407 ~ 17561807 (-) | False | G284145 |
| TU336633 | lncRNA | downstream | 41395 | 17548332 ~ 17553258 (-) | True | G284146 |
| TU336619 | lncRNA | downstream | 71010 | 17521426 ~ 17523643 (-) | True | G284135 |
| TU336618 | lncRNA | downstream | 79413 | 17513610 ~ 17515240 (-) | True | G284134 |
| TU336792 | lncRNA | upstream | 123006 | 17717905 ~ 17718238 (-) | True | G284273 |
| TU336814 | lncRNA | upstream | 167132 | 17762031 ~ 17764929 (-) | True | G284294 |
| TU336815 | lncRNA | upstream | 195635 | 17790534 ~ 17790763 (-) | True | G284295 |
| TU336843 | lncRNA | upstream | 255558 | 17850457 ~ 17850894 (-) | True | G284323 |
| TU336869 | lncRNA | upstream | 300436 | 17895335 ~ 17898230 (-) | True | G284349 |
| XM_026922642.2 | mRNA | downstream | 336 | 17591120 ~ 17594317 (-) | True | ckap4 |
| XM_034313293.1 | mRNA | downstream | 88156 | 17498388 ~ 17506497 (-) | True | LOC113531974 |
| XM_034313292.1 | mRNA | downstream | 89199 | 17498388 ~ 17505454 (-) | False | LOC113531974 |
| XM_034312988.1 | mRNA | downstream | 99866 | 17486811 ~ 17494787 (-) | True | LOC117599443 |
| XM_034313145.1 | mRNA | downstream | 109232 | 17484558 ~ 17485421 (-) | True | LOC117599538 |
| XM_026922984.2 | mRNA | upstream | 16991 | 17611890 ~ 17616249 (-) | True | LOC113531978 |
| XM_026923555.2 | mRNA | upstream | 200985 | 17795884 ~ 17809289 (-) | True | gnsa |
| XM_034313218.1 | mRNA | upstream | 312729 | 17907628 ~ 17971244 (-) | False | ano2b |
| XM_034313216.1 | mRNA | upstream | 312729 | 17907628 ~ 17971244 (-) | True | ano2b |
| XM_034313217.1 | mRNA | upstream | 312729 | 17907628 ~ 17971227 (-) | False | ano2b |
| trnar-ccg_5 | other | downstream | 491016 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU336422 | other | downstream | 629766 | 16958524 ~ 16964887 (-) | True | phf21b |
| TU335292 | other | downstream | 2417040 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| XR_003403346.2 | other | downstream | 5013590 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 5934326 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU337036 | other | upstream | 383886 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 383886 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| XR_004580005.1 | other | upstream | 475848 | 18070747 ~ 18082361 (-) | False | tmem209 |
| trnaa-ugc_10 | other | upstream | 488339 | 18083238 ~ 18083309 (-) | True | trnaa-ugc_10 |
| trnaa-ugc_11 | other | upstream | 488884 | 18083783 ~ 18083854 (-) | True | trnaa-ugc_11 |
