Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU336815 |
| length | 230 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G284295 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 17790534 ~ 17790763 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU336814 | lncRNA | downstream | 25605 | 17762031 ~ 17764929 (-) | True | G284294 |
| TU336792 | lncRNA | downstream | 72296 | 17717905 ~ 17718238 (-) | True | G284273 |
| TU336663 | lncRNA | downstream | 195635 | 17594653 ~ 17594899 (-) | True | G284165 |
| TU336631 | lncRNA | downstream | 225579 | 17558407 ~ 17564955 (-) | True | G284145 |
| TU336632 | lncRNA | downstream | 228727 | 17558407 ~ 17561807 (-) | False | G284145 |
| TU336843 | lncRNA | upstream | 59694 | 17850457 ~ 17850894 (-) | True | G284323 |
| TU336869 | lncRNA | upstream | 104572 | 17895335 ~ 17898230 (-) | True | G284349 |
| TU336874 | lncRNA | upstream | 110262 | 17901025 ~ 17901267 (-) | True | G284352 |
| TU337033 | lncRNA | upstream | 236971 | 18027734 ~ 18029915 (-) | False | ahcyl2b |
| TU337055 | lncRNA | upstream | 297891 | 18088654 ~ 18088942 (-) | True | G284520 |
| XM_026922984.2 | mRNA | downstream | 174285 | 17611890 ~ 17616249 (-) | True | LOC113531978 |
| XM_026922642.2 | mRNA | downstream | 196217 | 17591120 ~ 17594317 (-) | True | ckap4 |
| XM_034313293.1 | mRNA | downstream | 284037 | 17498388 ~ 17506497 (-) | True | LOC113531974 |
| XM_034313292.1 | mRNA | downstream | 285080 | 17498388 ~ 17505454 (-) | False | LOC113531974 |
| XM_034312988.1 | mRNA | downstream | 295747 | 17486811 ~ 17494787 (-) | True | LOC117599443 |
| XM_026923555.2 | mRNA | upstream | 5121 | 17795884 ~ 17809289 (-) | True | gnsa |
| XM_034313218.1 | mRNA | upstream | 116865 | 17907628 ~ 17971244 (-) | False | ano2b |
| XM_034313216.1 | mRNA | upstream | 116865 | 17907628 ~ 17971244 (-) | True | ano2b |
| XM_034313217.1 | mRNA | upstream | 116865 | 17907628 ~ 17971227 (-) | False | ano2b |
| XM_026923553.2 | mRNA | upstream | 116865 | 17907628 ~ 17954657 (-) | False | ano2b |
| trnar-ccg_5 | other | downstream | 686897 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU336422 | other | downstream | 825647 | 16958524 ~ 16964887 (-) | True | phf21b |
| TU335292 | other | downstream | 2612921 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| XR_003403346.2 | other | downstream | 5209471 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 6130207 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU337036 | other | upstream | 188022 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 188022 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| XR_004580005.1 | other | upstream | 279984 | 18070747 ~ 18082361 (-) | False | tmem209 |
| trnaa-ugc_10 | other | upstream | 292475 | 18083238 ~ 18083309 (-) | True | trnaa-ugc_10 |
| trnaa-ugc_11 | other | upstream | 293020 | 18083783 ~ 18083854 (-) | True | trnaa-ugc_11 |
