Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU338324 |
| length | 573 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G285630 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 20389735 ~ 20390426 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579993.1 | lncRNA | downstream | 77200 | 20307343 ~ 20312535 (-) | True | LOC117599590 |
| TU338286 | lncRNA | downstream | 97872 | 20278526 ~ 20291863 (-) | True | G285593 |
| TU338096 | lncRNA | downstream | 362840 | 20024743 ~ 20026895 (-) | True | G285426 |
| TU338098 | lncRNA | downstream | 422324 | 19962959 ~ 19967411 (-) | True | G285428 |
| TU338095 | lncRNA | downstream | 429156 | 19953613 ~ 19960579 (-) | True | G285425 |
| TU338338 | lncRNA | upstream | 11408 | 20401834 ~ 20402322 (-) | True | G285641 |
| TU338339 | lncRNA | upstream | 12596 | 20403022 ~ 20403257 (-) | True | G285642 |
| TU338400 | lncRNA | upstream | 49795 | 20440221 ~ 20441928 (-) | True | G285693 |
| TU338510 | lncRNA | upstream | 187830 | 20578256 ~ 20578483 (-) | True | G285791 |
| TU338572 | lncRNA | upstream | 313631 | 20704057 ~ 20776908 (-) | True | G285852 |
| XM_026923434.2 | mRNA | downstream | 133188 | 20242908 ~ 20256547 (-) | True | wif1 |
| XM_026922802.2 | mRNA | downstream | 467263 | 19898260 ~ 19922472 (-) | True | cand1 |
| XM_026922683.2 | mRNA | downstream | 492777 | 19891912 ~ 19896958 (-) | False | si:dkey-39a18.1 |
| XM_026922682.2 | mRNA | downstream | 493625 | 19891912 ~ 19896110 (-) | True | si:dkey-39a18.1 |
| XM_034313288.1 | mRNA | downstream | 521986 | 19859501 ~ 19867749 (-) | False | dyrk2 |
| XM_026923807.2 | mRNA | upstream | 69203 | 20459629 ~ 20500907 (-) | True | lmo3 |
| XM_026923806.2 | mRNA | upstream | 69203 | 20459629 ~ 20497375 (-) | False | lmo3 |
| XM_026923805.2 | mRNA | upstream | 69203 | 20459629 ~ 20496865 (-) | False | lmo3 |
| XM_026923804.2 | mRNA | upstream | 69203 | 20459629 ~ 20496492 (-) | False | lmo3 |
| XM_026923419.2 | mRNA | upstream | 319543 | 20709969 ~ 20712919 (-) | True | tmem121b |
| TU338301 | other | downstream | 69685 | 20313067 ~ 20320050 (-) | True | G285607 |
| trnae-cuc_38 | other | downstream | 2177342 | 18212322 ~ 18212393 (-) | True | trnae-cuc_38 |
| XR_003403330.2 | other | downstream | 2201737 | 18156824 ~ 18187998 (-) | True | cald1a |
| trnaa-ugc_14 | other | downstream | 2297191 | 18092473 ~ 18092544 (-) | False | trnaa-ugc_14 |
| trnaa-ugc_13 | other | downstream | 2299113 | 18090551 ~ 18090622 (-) | True | trnaa-ugc_13 |
| trnaa-ugc_16 | other | upstream | 31975 | 20422401 ~ 20422472 (-) | True | trnaa-ugc_16 |
| XR_004579970.1 | other | upstream | 1070400 | 21460826 ~ 21471100 (-) | False | LOC113544587 |
| XR_004579971.1 | other | upstream | 1070400 | 21460826 ~ 21471056 (-) | True | LOC113544587 |
| XR_003404518.2 | other | upstream | 1070401 | 21460827 ~ 21471100 (-) | False | LOC113544587 |
| XR_004579972.1 | other | upstream | 1070401 | 21460827 ~ 21471055 (-) | False | LOC113544587 |
