Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU339340 |
| length | 276 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G286546 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 21573825 ~ 21574100 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU339096 | lncRNA | downstream | 77206 | 21496377 ~ 21496619 (-) | True | G286337 |
| XR_004579864.1 | lncRNA | downstream | 81113 | 21491641 ~ 21492712 (-) | True | LOC117599448 |
| TU339057 | lncRNA | downstream | 164527 | 21409044 ~ 21409298 (-) | True | G286305 |
| TU339053 | lncRNA | downstream | 269296 | 21304255 ~ 21304529 (-) | True | G286301 |
| TU339022 | lncRNA | downstream | 338400 | 21235182 ~ 21235425 (-) | True | G286272 |
| XR_003404510.2 | lncRNA | upstream | 9965 | 21584065 ~ 21598400 (-) | True | LOC113544500 |
| XR_003404520.2 | lncRNA | upstream | 77522 | 21651622 ~ 21652431 (-) | True | LOC113544611 |
| TU339429 | lncRNA | upstream | 212052 | 21786152 ~ 21787372 (-) | True | G286613 |
| TU339527 | lncRNA | upstream | 498111 | 22072211 ~ 22075279 (-) | True | G286694 |
| TU339531 | lncRNA | upstream | 523508 | 22097608 ~ 22097821 (-) | True | G286698 |
| XM_026943470.2 | mRNA | downstream | 108292 | 21460827 ~ 21465533 (-) | False | LOC113544587 |
| XM_026922871.2 | mRNA | downstream | 347482 | 21189925 ~ 21226343 (-) | False | ppfibp1a |
| XM_026922869.2 | mRNA | downstream | 347482 | 21189925 ~ 21226343 (-) | True | ppfibp1a |
| XM_034313364.1 | mRNA | downstream | 358278 | 21189925 ~ 21215547 (-) | False | ppfibp1a |
| XM_034313152.1 | mRNA | downstream | 394314 | 21174184 ~ 21179511 (-) | True | LOC113531875 |
| XM_034313134.1 | mRNA | upstream | 29800 | 21603900 ~ 21630503 (-) | False | nrf1 |
| XM_026943465.2 | mRNA | upstream | 29800 | 21603900 ~ 21630503 (-) | True | nrf1 |
| XM_026943483.2 | mRNA | upstream | 157489 | 21731589 ~ 21751582 (-) | True | ints13 |
| XM_034313049.1 | mRNA | upstream | 187581 | 21761681 ~ 21782085 (-) | True | cog5 |
| XM_034313294.1 | mRNA | upstream | 222805 | 21796905 ~ 21842435 (-) | True | slco1c1 |
| XR_004579970.1 | other | downstream | 102725 | 21460826 ~ 21471100 (-) | False | LOC113544587 |
| XR_003404518.2 | other | downstream | 102725 | 21460827 ~ 21471100 (-) | False | LOC113544587 |
| XR_004579971.1 | other | downstream | 102769 | 21460826 ~ 21471056 (-) | True | LOC113544587 |
| XR_004579972.1 | other | downstream | 102770 | 21460827 ~ 21471055 (-) | False | LOC113544587 |
| trnaa-ugc_16 | other | downstream | 1151353 | 20422401 ~ 20422472 (-) | True | trnaa-ugc_16 |
| TU339722 | other | upstream | 912136 | 22486236 ~ 22489467 (-) | True | G286852 |
