Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034313133.1 |
| length | 1270 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 10 |
| gene id | LOC113531734 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 16688373 ~ 16699456 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K00251 | AKR1D1; 3-oxo-5-beta-steroid 4-dehydrogenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579992.1 | lncRNA | downstream | 68655 | 16618712 ~ 16619718 (-) | True | LOC117599589 |
| TU335948 | lncRNA | downstream | 238607 | 16448439 ~ 16449766 (-) | True | G283546 |
| TU335946 | lncRNA | downstream | 238607 | 16449017 ~ 16449766 (-) | False | G283546 |
| TU335947 | lncRNA | downstream | 239598 | 16448439 ~ 16448775 (-) | False | G283546 |
| TU335937 | lncRNA | downstream | 286425 | 16400921 ~ 16401948 (-) | False | alg12 |
| TU336181 | lncRNA | upstream | 139079 | 16838535 ~ 16849762 (-) | False | LOC113532230 |
| TU336452 | lncRNA | upstream | 342171 | 17041627 ~ 17043280 (-) | True | G284003 |
| TU336615 | lncRNA | upstream | 807420 | 17506876 ~ 17507145 (-) | True | G284131 |
| TU336618 | lncRNA | upstream | 814154 | 17513610 ~ 17515240 (-) | True | G284134 |
| TU336619 | lncRNA | upstream | 821970 | 17521426 ~ 17523643 (-) | True | G284135 |
| XM_026923800.2 | mRNA | downstream | 2971 | 16663927 ~ 16685402 (-) | False | kdm5a |
| XM_026923799.2 | mRNA | downstream | 2971 | 16663927 ~ 16685402 (-) | True | kdm5a |
| XM_026923801.2 | mRNA | downstream | 26011 | 16649072 ~ 16662362 (-) | True | LOC113532402 |
| XM_026923803.2 | mRNA | downstream | 26022 | 16649072 ~ 16662351 (-) | False | LOC113532402 |
| XM_026922862.2 | mRNA | downstream | 40691 | 16622103 ~ 16647682 (-) | False | LOC113531895 |
| XM_026923299.2 | mRNA | upstream | 69814 | 16769270 ~ 16771695 (-) | True | LOC113532119 |
| XM_034313042.1 | mRNA | upstream | 116304 | 16815760 ~ 16817420 (-) | True | kcna1b |
| XM_026923499.2 | mRNA | upstream | 139945 | 16839401 ~ 16853395 (-) | True | LOC113532230 |
| XM_026922958.2 | mRNA | upstream | 259056 | 16958512 ~ 17027865 (-) | False | phf21b |
| XM_026922955.2 | mRNA | upstream | 259056 | 16958512 ~ 17027865 (-) | False | phf21b |
| TU335292 | other | downstream | 1510760 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| XR_003403346.2 | other | downstream | 4107310 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 5028046 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 5100349 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 5428981 | 11238935 ~ 11259392 (-) | True | vegfab |
| TU336422 | other | upstream | 259068 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 404109 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 1279329 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 1279329 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| XR_004580005.1 | other | upstream | 1371291 | 18070747 ~ 18082361 (-) | False | tmem209 |
