Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026923777.2 |
| length | 1042 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 4 |
| gene id | shisal1a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 12488395 ~ 12517683 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU333645 | lncRNA | downstream | 18410 | 12476264 ~ 12477629 (-) | True | G281527 |
| TU333624 | lncRNA | downstream | 36947 | 12457563 ~ 12459092 (-) | True | G281510 |
| TU333597 | lncRNA | downstream | 126774 | 12368959 ~ 12369265 (-) | True | G281486 |
| TU333565 | lncRNA | downstream | 241884 | 12251314 ~ 12254155 (-) | True | G281455 |
| TU333459 | lncRNA | downstream | 401980 | 12093857 ~ 12094059 (-) | True | G281373 |
| XR_003403338.2 | lncRNA | upstream | 628606 | 13146282 ~ 13147358 (-) | True | LOC113532391 |
| TU334183 | lncRNA | upstream | 650999 | 13168675 ~ 13210493 (-) | True | G281964 |
| TU334201 | lncRNA | upstream | 741476 | 13259152 ~ 13285718 (-) | True | G281981 |
| TU334236 | lncRNA | upstream | 802497 | 13320173 ~ 13373048 (-) | False | G282006 |
| TU334237 | lncRNA | upstream | 802497 | 13320173 ~ 13321414 (-) | True | G282006 |
| XM_026923619.2 | mRNA | downstream | 44454 | 12445898 ~ 12451585 (-) | True | si:ch211-214j24.10 |
| XM_026923617.2 | mRNA | downstream | 60848 | 12430448 ~ 12435191 (-) | True | apex1 |
| XM_026923527.2 | mRNA | downstream | 80965 | 12411859 ~ 12415074 (-) | True | LOC113532240 |
| XM_026922708.2 | mRNA | downstream | 86509 | 12402179 ~ 12409530 (-) | True | LOC113531803 |
| XM_026923092.2 | mRNA | downstream | 101518 | 12375791 ~ 12394521 (-) | True | mapk11 |
| XM_026923288.2 | mRNA | upstream | 52392 | 12570068 ~ 12579954 (-) | True | cmasa |
| XM_026923289.2 | mRNA | upstream | 67161 | 12584837 ~ 12588680 (-) | True | kcnj8 |
| XM_026922806.2 | mRNA | upstream | 74411 | 12592087 ~ 12636416 (-) | False | abcc9 |
| XM_026922804.2 | mRNA | upstream | 74411 | 12592087 ~ 12636416 (-) | True | abcc9 |
| XM_026922809.2 | mRNA | upstream | 74411 | 12592087 ~ 12633220 (-) | False | abcc9 |
| TU333129 | other | downstream | 835712 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU333108 | other | downstream | 908015 | 11586304 ~ 11588024 (-) | True | G281074 |
| TU332827 | other | downstream | 1236647 | 11238935 ~ 11259392 (-) | True | vegfab |
| XR_004579975.1 | other | downstream | 1488896 | 10995105 ~ 11007143 (-) | True | si:ch211-51e12.7 |
| TU332243 | other | downstream | 2199918 | 10269757 ~ 10296121 (-) | False | LOC113532274 |
| XR_003403346.2 | other | upstream | 63247 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU335292 | other | upstream | 2656672 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| TU336422 | other | upstream | 4440848 | 16958524 ~ 16964887 (-) | True | phf21b |
| trnar-ccg_5 | other | upstream | 4585889 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU337036 | other | upstream | 5461109 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
