Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026923805.2 |
| length | 1045 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 4 |
| gene id | lmo3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 20459629 ~ 20500907 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU338400 | lncRNA | downstream | 17701 | 20440221 ~ 20441928 (-) | True | G285693 |
| TU338339 | lncRNA | downstream | 56372 | 20403022 ~ 20403257 (-) | True | G285642 |
| TU338338 | lncRNA | downstream | 57307 | 20401834 ~ 20402322 (-) | True | G285641 |
| TU338324 | lncRNA | downstream | 69203 | 20389735 ~ 20390426 (-) | True | G285630 |
| XR_004579993.1 | lncRNA | downstream | 147094 | 20307343 ~ 20312535 (-) | True | LOC117599590 |
| TU338510 | lncRNA | upstream | 81391 | 20578256 ~ 20578483 (-) | True | G285791 |
| TU338572 | lncRNA | upstream | 207192 | 20704057 ~ 20776908 (-) | True | G285852 |
| XR_004579968.1 | lncRNA | upstream | 240103 | 20736968 ~ 20749220 (-) | True | LOC117599568 |
| TU338579 | lncRNA | upstream | 252901 | 20749766 ~ 20752267 (-) | True | G285859 |
| TU338627 | lncRNA | upstream | 399416 | 20896281 ~ 20896487 (-) | True | G285907 |
| XM_026923434.2 | mRNA | downstream | 203082 | 20242908 ~ 20256547 (-) | True | wif1 |
| XM_026922802.2 | mRNA | downstream | 537157 | 19898260 ~ 19922472 (-) | True | cand1 |
| XM_026922683.2 | mRNA | downstream | 562671 | 19891912 ~ 19896958 (-) | False | si:dkey-39a18.1 |
| XM_026922682.2 | mRNA | downstream | 563519 | 19891912 ~ 19896110 (-) | True | si:dkey-39a18.1 |
| XM_034313288.1 | mRNA | downstream | 591880 | 19859501 ~ 19867749 (-) | False | dyrk2 |
| XM_026923419.2 | mRNA | upstream | 213104 | 20709969 ~ 20712919 (-) | True | tmem121b |
| XM_026923824.2 | mRNA | upstream | 218175 | 20715040 ~ 20729637 (-) | False | mkrn1 |
| XM_026923823.2 | mRNA | upstream | 218175 | 20715040 ~ 20729637 (-) | True | mkrn1 |
| XM_026922583.2 | mRNA | upstream | 295608 | 20792473 ~ 20894630 (-) | True | tmem178b |
| XM_026923081.2 | mRNA | upstream | 442880 | 20939745 ~ 21133493 (-) | False | btbd11a |
| trnaa-ugc_16 | other | downstream | 37157 | 20422401 ~ 20422472 (-) | True | trnaa-ugc_16 |
| TU338301 | other | downstream | 139579 | 20313067 ~ 20320050 (-) | True | G285607 |
| trnae-cuc_38 | other | downstream | 2247236 | 18212322 ~ 18212393 (-) | True | trnae-cuc_38 |
| XR_003403330.2 | other | downstream | 2271631 | 18156824 ~ 18187998 (-) | True | cald1a |
| trnaa-ugc_14 | other | downstream | 2367085 | 18092473 ~ 18092544 (-) | False | trnaa-ugc_14 |
| XR_004579970.1 | other | upstream | 963961 | 21460826 ~ 21471100 (-) | False | LOC113544587 |
| XR_004579971.1 | other | upstream | 963961 | 21460826 ~ 21471056 (-) | True | LOC113544587 |
| XR_003404518.2 | other | upstream | 963962 | 21460827 ~ 21471100 (-) | False | LOC113544587 |
| XR_004579972.1 | other | upstream | 963962 | 21460827 ~ 21471055 (-) | False | LOC113544587 |
| TU339722 | other | upstream | 1989371 | 22486236 ~ 22489467 (-) | True | G286852 |
