Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034312988.1 |
| length | 1116 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 7 |
| gene id | LOC117599443 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 17486811 ~ 17494787 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU336452 | lncRNA | downstream | 443531 | 17041627 ~ 17043280 (-) | True | G284003 |
| TU336181 | lncRNA | downstream | 637049 | 16838535 ~ 16849762 (-) | False | LOC113532230 |
| XR_004579992.1 | lncRNA | downstream | 867093 | 16618712 ~ 16619718 (-) | True | LOC117599589 |
| TU335948 | lncRNA | downstream | 1037045 | 16448439 ~ 16449766 (-) | True | G283546 |
| TU336615 | lncRNA | upstream | 12089 | 17506876 ~ 17507145 (-) | True | G284131 |
| TU336618 | lncRNA | upstream | 18823 | 17513610 ~ 17515240 (-) | True | G284134 |
| TU336619 | lncRNA | upstream | 26639 | 17521426 ~ 17523643 (-) | True | G284135 |
| TU336633 | lncRNA | upstream | 53545 | 17548332 ~ 17553258 (-) | True | G284146 |
| TU336631 | lncRNA | upstream | 63620 | 17558407 ~ 17564955 (-) | True | G284145 |
| XM_034313145.1 | mRNA | downstream | 1390 | 17484558 ~ 17485421 (-) | True | LOC117599538 |
| XM_026923395.2 | mRNA | downstream | 5977 | 17462955 ~ 17480834 (-) | True | slc37a3 |
| XM_026923436.2 | mRNA | downstream | 47733 | 17434442 ~ 17439078 (-) | True | sapcd1 |
| XM_026922628.2 | mRNA | downstream | 170229 | 17261690 ~ 17316582 (-) | True | LOC113531742 |
| XM_026923621.2 | mRNA | downstream | 293572 | 17119346 ~ 17193239 (-) | True | LOC113532299 |
| XM_034313293.1 | mRNA | upstream | 3601 | 17498388 ~ 17506497 (-) | True | LOC113531974 |
| XM_034313292.1 | mRNA | upstream | 3601 | 17498388 ~ 17505454 (-) | False | LOC113531974 |
| XM_026922642.2 | mRNA | upstream | 96333 | 17591120 ~ 17594317 (-) | True | ckap4 |
| XM_026922984.2 | mRNA | upstream | 117103 | 17611890 ~ 17616249 (-) | True | LOC113531978 |
| XM_026923555.2 | mRNA | upstream | 301097 | 17795884 ~ 17809289 (-) | True | gnsa |
| trnar-ccg_5 | other | downstream | 383174 | 17103565 ~ 17103637 (-) | True | trnar-ccg_5 |
| TU336422 | other | downstream | 521924 | 16958524 ~ 16964887 (-) | True | phf21b |
| TU335292 | other | downstream | 2309198 | 15174348 ~ 15177613 (-) | False | LOC113531972 |
| XR_003403346.2 | other | downstream | 4905748 | 12580923 ~ 12581063 (-) | True | LOC113532438 |
| TU333129 | other | downstream | 5826484 | 11657890 ~ 11660327 (-) | True | G281092 |
| TU337036 | other | upstream | 483998 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| TU337037 | other | upstream | 483998 | 17978785 ~ 17980246 (-) | False | LOC113532261 |
| XR_004580005.1 | other | upstream | 575960 | 18070747 ~ 18082361 (-) | False | tmem209 |
| trnaa-ugc_10 | other | upstream | 588451 | 18083238 ~ 18083309 (-) | True | trnaa-ugc_10 |
| trnaa-ugc_11 | other | upstream | 588996 | 18083783 ~ 18083854 (-) | True | trnaa-ugc_11 |
